RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 P4HA1P13674 534 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 AKAP5P24588 427 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 YARSP54577 528 aaKnown RBP17.9■□□□□ 0.46
SREK1-212ENST00000522912 NOGQ13253 232 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 GDAP1L1Q96MZ0 367 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 APOL6Q9BWW8 343 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 MRPL47Q9HD33 250 aaKnown RBP17.9■□□□□ 0.46
SREK1-212ENST00000522912 ERVK-5Q9HDB9 667 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 CNTN3Q9P232 1028 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 TUBGCP4Q9UGJ1 667 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 GTF2IRD1Q9UHL9 959 aa17.9■□□□□ 0.46
SREK1-212ENST00000522912 TCRBV5S1A1TA0A578 114 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 ESYT3A0FGR9 886 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 PROSCO94903 275 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 NKX3-2P78367 333 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 PTPN11Q06124 597 aaPredicted RBP17.89■□□□□ 0.46
SREK1-212ENST00000522912 TRADDQ15628 312 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 GLRA4Q5JXX5 417 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 DAB2IPQ5VWQ8 1189 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 GDF6Q6KF10 455 aaPredicted RBP17.89■□□□□ 0.46
SREK1-212ENST00000522912 IFT20Q8IY31 132 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 CASKIN2Q8WXE0 1202 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 NAP1L3Q99457 506 aaPredicted RBP17.89■□□□□ 0.46
SREK1-212ENST00000522912 CELF4Q9BZC1 486 aaKnown RBP17.89■□□□□ 0.46
SREK1-212ENST00000522912 UBXN6Q9BZV1 441 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 PARVAQ9NVD7 372 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 SCINQ9Y6U3 715 aa17.89■□□□□ 0.46
SREK1-212ENST00000522912 CALB1P05937 261 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 RARBP10826 455 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 CCND3P30281 292 aaPredicted RBP17.89■□□□□ 0.45
SREK1-212ENST00000522912 SLC1A1P43005 524 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 CARSP49589 748 aaKnown RBP17.89■□□□□ 0.45
SREK1-212ENST00000522912 RWDD2BP57060 319 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 INCA1Q0VD86 236 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 TAF2Q6P1X5 1199 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 ZDHHC14Q8IZN3 488 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 FEZF2Q8TBJ5 459 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 TMEM176AQ96HP8 235 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 LHX5Q9H2C1 402 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 SLITRK6Q9H5Y7 841 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 RNF186Q9NXI6 227 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 AMACRQ9UHK6 382 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 CYTH4Q9UIA0 394 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 DNAH12Q6ZR08 3092 aa17.89■□□□□ 0.45
SREK1-212ENST00000522912 BHMG1C9JSJ3 638 aaPredicted RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 MED7O43513 233 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 TNNT3P45378 269 aaPredicted RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 RPL7AP62424 266 aaKnown RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 MRPS6P82932 125 aaKnown RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 SEL1L2Q5TEA6 688 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 FAM228AQ86W67 206 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 ERICH1Q86X53 443 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 WNT8BQ93098 351 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 SPC25Q9HBM1 224 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 KLK14Q9P0G3 267 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 BARX2Q9UMQ3 279 aaPredicted RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 ELNP15502 786 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 NDST1P52848 882 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 SP3Q02447 781 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 CLUL1Q15846 466 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 KCTD19Q17RG1 926 aaPredicted RBP17.88■□□□□ 0.45
SREK1-212ENST00000522912 BEST2Q8NFU1 509 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 ST7Q9NRC1 585 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 CDY2AQ9Y6F7 541 aa17.88■□□□□ 0.45
SREK1-212ENST00000522912 TCRBV7S2A1N4TA0A589 114 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 TMEM191CA6NGB0 347 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 MYO1EQ12965 1108 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 PTPN20Q4JDL3 420 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 CYP4A22Q5TCH4 519 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 SMG8Q8ND04 991 aaKnown RBP17.87■□□□□ 0.45
SREK1-212ENST00000522912 IFT81Q8WYA0 676 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 CAPNS2Q96L46 248 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 XPNPEP3Q9NQH7 507 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 TJP2Q9UDY2 1190 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 NFU1Q9UMS0 254 aa17.87■□□□□ 0.45
SREK1-212ENST00000522912 SMIM28A0A1B0GU29 152 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 O00370 1275 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 MICAL2O94851 1124 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 EPHB4P54760 987 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 TAS2R40P59535 323 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
SREK1-212ENST00000522912 XKR4Q5GH76 650 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 PPP1R15BQ5SWA1 713 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 C9orf57Q5W0N0 161 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 SLC13A5Q86YT5 568 aaPredicted RBP17.86■□□□□ 0.45
SREK1-212ENST00000522912 PRELID2Q8N945 189 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 ARRDC4Q8NCT1 418 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 ZBTB9Q96C00 473 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 DDX27Q96GQ7 796 aaKnown RBP17.86■□□□□ 0.45
SREK1-212ENST00000522912 HEXIM2Q96MH2 286 aaKnown RBP17.86■□□□□ 0.45
SREK1-212ENST00000522912 PARP2Q9UGN5 583 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.86■□□□□ 0.45
SREK1-212ENST00000522912 IPPQ9Y573 584 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 TTI1O43156 1089 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 VDRP11473 427 aa17.86■□□□□ 0.45
SREK1-212ENST00000522912 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms