RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ZNF844Q08AG5 666 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 TCF15Q12870 199 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 PMS2P11Q13670 270 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 STARD3Q14849 445 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 NOMO2Q5JPE7 1267 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 C1QL4Q86Z23 238 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 ZFPM1Q8IX07 1006 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 CFAP52Q8N1V2 620 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 ZNF527Q8NB42 609 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 PDPRQ8NCN5 879 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 CCDC150Q8NCX0 1101 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 SPSB4Q96A44 273 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 FAM89AQ96GI7 184 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 MARS2Q96GW9 593 aaKnown RBP6.53□□□□□ -1.36
SSR3-208ENST00000496050 KCNC2Q96PR1 638 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 MNTQ99583 582 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 SPATA5L1Q9BVQ7 753 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 TTLL2Q9BWV7 592 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 MS4A7Q9GZW8 240 aaPredicted RBP6.53□□□□□ -1.36
SSR3-208ENST00000496050 ZCCHC4Q9H5U6 513 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 ATP11BQ9Y2G3 1177 aa6.53□□□□□ -1.36
SSR3-208ENST00000496050 A0A087WV62 115 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 CAPN14A8MX76 684 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 CYP27B1O15528 508 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 FFAR2O15552 330 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 INMTO95050 263 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 PRSS23O95084 383 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 TXNP10599 105 aaKnown RBP6.52□□□□□ -1.37
SSR3-208ENST00000496050 TYRP1P17643 537 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 VIPR2P41587 438 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 PPM1FP49593 454 aaPredicted RBP6.52□□□□□ -1.37
SSR3-208ENST00000496050 WNT3P56703 355 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 SATB1Q01826 763 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 ICA1Q05084 483 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 IQCB1Q15051 598 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 C4orf46Q504U0 113 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 DCAF12L1Q5VU92 463 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 NAIF1Q69YI7 327 aaPredicted RBP6.52□□□□□ -1.37
SSR3-208ENST00000496050 SPOCD1Q6ZMY3 1216 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 PPP1R32Q7Z5V6 425 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 DNERQ8NFT8 737 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 OR56A3Q8NH54 315 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 PPM1EQ8WY54 764 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 CCT6BQ92526 530 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
SSR3-208ENST00000496050 GJB4Q9NTQ9 266 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 TBC1D23Q9NUY8 699 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 ZNF212Q9UDV6 495 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 MAN2B2Q9Y2E5 1009 aa6.52□□□□□ -1.37
SSR3-208ENST00000496050 OTOL1A6NHN0 477 aaPredicted RBP6.51□□□□□ -1.37
SSR3-208ENST00000496050 CLCA1A8K7I4 914 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 TMEM233B4DJY2 109 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 E9PLN8 166 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 GPR42O15529 346 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 NBNO60934 754 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 VPS4BO75351 444 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 BTF3P20290 206 aaKnown RBP6.51□□□□□ -1.37
SSR3-208ENST00000496050 COMTP21964 271 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 NHLH2Q02577 135 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 RAPGEF1Q13905 1077 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 SLC29A2Q14542 456 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
SSR3-208ENST00000496050 ELF2Q15723 593 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 SLC35G1Q2M3R5 365 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
SSR3-208ENST00000496050 FOXR2Q6PJQ5 311 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 LIMS2Q7Z4I7 341 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 SYT12Q8IV01 421 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 RHOT2Q8IXI1 618 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 MYRIPQ8NFW9 859 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 TRIB1Q96RU8 372 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 VKORC1Q9BQB6 163 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 GPR87Q9BY21 358 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 XPNPEP3Q9NQH7 507 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 TM7SF3Q9NS93 570 aa6.51□□□□□ -1.37
SSR3-208ENST00000496050 MORC2Q9Y6X9 1032 aaPredicted RBP6.51□□□□□ -1.37
SSR3-208ENST00000496050 ADAMTS20P59510 1910 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 FCER1AP12319 257 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 MYL4P12829 197 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 IL1R2P27930 398 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 HIBADHP31937 336 aaKnown RBP6.5□□□□□ -1.37
SSR3-208ENST00000496050 RABGGTBP53611 331 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 SLFN5Q08AF3 891 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 INSCQ1MX18 579 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 CCDC38Q502W7 563 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 FAM102AQ5T9C2 384 aaPredicted RBP6.5□□□□□ -1.37
SSR3-208ENST00000496050 AGAP9Q5VTM2 703 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 CCDC174Q6PII3 467 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 SMAP1Q8IYB5 467 aaPredicted RBP6.5□□□□□ -1.37
SSR3-208ENST00000496050 VGLL2Q8N8G2 317 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 SPATA5Q8NB90 893 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 FANCBQ8NB91 859 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 SMCR8Q8TEV9 937 aaPredicted RBP6.5□□□□□ -1.37
SSR3-208ENST00000496050 RAPGEF4Q8WZA2 1011 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 SCLT1Q96NL6 688 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms