RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 SMG7Q92540 1137 aaKnown RBP4.31□□□□□ -1.72
VPS36-205ENST00000492650 SCAMP4Q969E2 229 aa4.31□□□□□ -1.72
VPS36-205ENST00000492650 MTMR8Q96EF0 704 aa4.31□□□□□ -1.72
VPS36-205ENST00000492650 DMRTA2Q96SC8 542 aa4.31□□□□□ -1.72
VPS36-205ENST00000492650 CCDC8Q9H0W5 538 aaPredicted RBP4.31□□□□□ -1.72
VPS36-205ENST00000492650 SLAMF7Q9NQ25 335 aa4.31□□□□□ -1.72
VPS36-205ENST00000492650 GNL3LQ9NVN8 582 aaKnown RBP4.31□□□□□ -1.72
VPS36-205ENST00000492650 hCG_2014768A0A024R1R8 64 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 VWC2LB2RUY7 222 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 E9PLN8 166 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 GCOM1H8Y6P7 765 aaPredicted RBP4.3□□□□□ -1.72
VPS36-205ENST00000492650 F2RL2O00254 374 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 URI1O94763 535 aaPredicted RBP4.3□□□□□ -1.72
VPS36-205ENST00000492650 ERBB2P04626 1255 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 CYP2C19P33261 490 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 ZNF81P51508 661 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 KRTAP10-11P60412 298 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 SNAPC2Q13487 334 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 MTMR1Q13613 665 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
VPS36-205ENST00000492650 PTPROQ16827 1216 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 CCDC181Q5TID7 509 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 KIAA1614Q5VZ46 1190 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 FCRLBQ6BAA4 426 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 TMPRSS9Q7Z410 1059 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 CAMKK1Q8N5S9 505 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 POC1BQ8TC44 478 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 VKORC1Q9BQB6 163 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 SERPINB13Q9UIV8 391 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 PADI4Q9UM07 663 aa4.3□□□□□ -1.72
VPS36-205ENST00000492650 CFAP20Q9Y6A4 193 aaKnown RBP4.3□□□□□ -1.72
VPS36-205ENST00000492650 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
VPS36-205ENST00000492650 SPATA31A3Q5VYP0 1347 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 ADGRA2Q96PE1 1338 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 WDR91A4D1P6 747 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 ZNF785A8K8V0 405 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 VPS4BO75351 444 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 PRKCGP05129 697 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 GJB1P08034 283 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 RHOP08100 348 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 CCND1P24385 295 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 ITPKBP27987 946 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 PHKA1P46020 1223 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 NDUFV1P49821 464 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 FAM50AQ14320 339 aaKnown RBP4.29□□□□□ -1.72
VPS36-205ENST00000492650 RNF187Q5TA31 235 aaPredicted RBP4.29□□□□□ -1.72
VPS36-205ENST00000492650 SLC4A10Q6U841 1118 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 TICAM2Q86XR7 235 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
VPS36-205ENST00000492650 ANKS1AQ92625 1134 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 DPF1Q92782 380 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 FKBP10Q96AY3 582 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 PBKQ96KB5 322 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 ACTRT3Q9BYD9 372 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 BRINP2Q9C0B6 783 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 MYH16Q9H6N6 1097 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 WDR26Q9H7D7 661 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 SLC52A1Q9NWF4 448 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 SIDT1Q9NXL6 827 aaKnown RBP4.29□□□□□ -1.72
VPS36-205ENST00000492650 CFAP97Q9P2B7 532 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 ADAM21Q9UKJ8 722 aa4.29□□□□□ -1.72
VPS36-205ENST00000492650 FNDC1Q4ZHG4 1894 aaPredicted RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 AOX1Q06278 1338 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 WDR27A2RRH5 827 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 WIPF3A6NGB9 483 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 LRRC14BA6NHZ5 514 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 TPD52L2O43399 206 aaKnown RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 KATNA1O75449 491 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 EBLN1P0CF75 366 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 CHRM3P20309 590 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 ITGALP20701 1170 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 IBSPP21815 317 aaPredicted RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 LPOP22079 712 aaPredicted RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 CCT8P50990 548 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 ZNF135P52742 658 aaPredicted RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 ADKP55263 362 aaKnown RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 GRM1Q13255 1194 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 HABP2Q14520 560 aaPredicted RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 PTPN21Q16825 1174 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 TMEM119Q4V9L6 283 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 PLAC9Q5JTB6 97 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 SUMO4Q6EEV6 95 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 TMED8Q6PL24 325 aaPredicted RBP4.28□□□□□ -1.72
VPS36-205ENST00000492650 MIER2Q8N344 545 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 C3orf20Q8ND61 904 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 PSD4Q8NDX1 1056 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 ZNF778Q96MU6 729 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 ALG8Q9BVK2 526 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 AMBRA1Q9C0C7 1298 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 SMOC2Q9H3U7 446 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 EHD3Q9NZN3 535 aa4.28□□□□□ -1.72
VPS36-205ENST00000492650 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS36-205ENST00000492650 NT5C1B-RDH14C9J2C7 533 aa4.27□□□□□ -1.73
VPS36-205ENST00000492650 GABRDO14764 452 aa4.27□□□□□ -1.73
VPS36-205ENST00000492650 CHEK2O96017 543 aa4.27□□□□□ -1.73
VPS36-205ENST00000492650 HNRNPCP07910 306 aaKnown RBP eCLIP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms