RNA–Protein interactions for RNA: ENST00000491086.5

RNF13-215, Transcript of ring finger protein 13, human

TSL 2

Gene RNF13, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-215	ENST00000491086	GDPD5	Q8WTR4	605 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	YME1L1	Q96TA2	773 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	ZSWIM1	Q9BR11	485 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	HAUS4	Q9H6D7	363 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	CYP3A43	Q9HB55	503 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	CISH	Q9NSE2	258 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	HCST	Q9UBK5	93 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	NXF1	Q9UBU9	619 aa	Known RBP	13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	INPP5F	Q9Y2H2	1132 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	PCDHB7	Q9Y5E2	793 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	BRWD1	Q9NSI6	2320 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	LINC01553	A4QN01	128 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	KPNA7	A9QM74	516 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	DDX3X	O00571	662 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	2e-7	■■■■□ 20
RNF13-215	ENST00000491086	PODXL	O00592	558 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	EFCAB14	O75071	495 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	CILP	O75339	1184 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	CALCA	P01258	141 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	PNPLA4	P41247	253 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	TAF6	P49848	677 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	ARID5A	Q03989	594 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	KLHL30	Q0D2K2	578 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	ADGRE1	Q14246	886 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	NOP9	Q86U38	636 aa	Known RBP	13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	SLC47A2	Q86VL8	602 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	ZSCAN30	Q86W11	494 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	CCDC170	Q8IYT3	715 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	MICALL1	Q8N3F8	863 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	LNX1	Q8TBB1	728 aa	Predicted RBP	13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	KBTBD7	Q8WVZ9	684 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	TOP1MT	Q969P6	601 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF689	Q96CS4	500 aa	Predicted RBP	13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	TWNK	Q96RR1	684 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	C17orf80	Q9BSJ5	609 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	ADGRG1	Q9Y653	693 aa		13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	BZW2	Q9Y6E2	419 aa	Known RBP	13.85	□□□□□ -0.19
RNF13-215	ENST00000491086	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.85	□□□□□ -0.19
RNF13-215	ENST00000491086		A0A087X0T9	212 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	CASTOR2	A6NHX0	329 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	EIF3CL	B5ME19	914 aa	Known RBP	13.84	□□□□□ -0.19
RNF13-215	ENST00000491086		F8W810	466 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	TMEM189-UBE2V1	I3L0A0	370 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	DGKI	O75912	1065 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	NDUFA10	O95299	355 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	ITGB1	P05556	798 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	FAM163B	P0C2L3	166 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	FAM228B	P0C875	321 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	CYP11B1	P15538	503 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	RAD23B	P54727	409 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	MYO1E	Q12965	1108 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	TSR1	Q2NL82	804 aa	Known RBP	13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	SCARA5	Q6ZMJ2	495 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	FMNL3	Q8IVF7	1028 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	SLC20A1	Q8WUM9	679 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	PPM1E	Q8WY54	764 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	RABGGTA	Q92696	567 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	DDX27	Q96GQ7	796 aa	Known RBP	13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF560	Q96MR9	790 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	UROC1	Q96N76	676 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	EIF3C	Q99613	913 aa	Known RBP	13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	MRPL45	Q9BRJ2	306 aa	Known RBP	13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	ELOVL4	Q9GZR5	314 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	NRDE2	Q9H7Z3	1164 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	KANSL3	Q9P2N6	904 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	DNAJB4	Q9UDY4	337 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	HMGXB4	Q9UGU5	601 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	PCDHB4	Q9Y5E5	795 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	REV3L	O60673	3130 aa		13.84	□□□□□ -0.19
RNF13-215	ENST00000491086	TMEM265	A0A087WTH1	108 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086		A0A0U1RQJ8	604 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	USP27X	A6NNY8	438 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	TACC1	O75410	805 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	EFEMP2	O95967	443 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	IGFBP4	P22692	258 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	ANXA13	P27216	316 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	KIF11	P52732	1056 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	HTRA4	P83105	476 aa	Predicted RBP	13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	FMO1	Q01740	532 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	SV2C	Q496J9	727 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	TIGD5	Q53EQ6	642 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	TMEM270	Q6UE05	265 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	OSTM1	Q86WC4	334 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	PALB2	Q86YC2	1186 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	REXO1L1P	Q8IX06	675 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	SLC4A11	Q8NBS3	891 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	ACRBP	Q8NEB7	543 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	ATRIP	Q8WXE1	791 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	RSPH1	Q8WYR4	309 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	PCDHB18P	Q96TA0	734 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	RAD9A	Q99638	391 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	AGPAT1	Q99943	283 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	DESI2	Q9BSY9	194 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	SPTLC3	Q9NUV7	552 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	L1RE1	Q9UN81	338 aa		13.83	□□□□□ -0.2
RNF13-215	ENST00000491086	SNX9	Q9Y5X1	595 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms