RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 AMPD2Q01433 879 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 VEPH1Q14D04 833 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 ZNF174Q15697 407 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 SLC10A6Q3KNW5 377 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 TMEM196Q5HYL7 178 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 OVOS1Q6IE37 1185 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 TMEM130Q8N3G9 435 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 NECAB1Q8N987 351 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 SEPT5Q99719 369 aaPredicted RBP20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 EBF3Q9H4W6 596 aa20.64■□□□□ 0.89
NCKIPSD-209ENST00000470006 SPEGQ15772 3267 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 ZNF638Q14966 1978 aaKnown RBP20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 MTMR11A4FU01 709 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 TMEM8BA6NDV4 472 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 EGFP01133 1207 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 CDR1P51861 262 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 STRN3Q13033 797 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 RUNX3Q13761 415 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 TRIM68Q6AZZ1 485 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 TTC9BQ8N6N2 239 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 KIF12Q96FN5 646 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 LPIN3Q9BQK8 851 aa20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 RBM19Q9Y4C8 960 aaKnown RBP20.63■□□□□ 0.89
NCKIPSD-209ENST00000470006 SLC16A4O15374 487 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 MEFVO15553 781 aaPredicted RBP20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 HIP1RO75146 1068 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 TOP3BO95985 862 aaKnown RBP20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 MUTP22033 750 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 PROZP22891 400 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 CDC25CP30307 473 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 PSMD2Q13200 908 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 MYBPC2Q14324 1141 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 NOLC1Q14978 699 aaKnown RBP eCLIP20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 KARSQ15046 597 aaKnown RBP20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 ECM1Q16610 540 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 TAS1R3Q7RTX0 852 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 SCNM1Q9BWG6 230 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 TMEM9BQ9NQ34 198 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 DDX19AQ9NUU7 478 aaKnown RBP20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 INVSQ9Y283 1065 aa20.62■□□□□ 0.89
NCKIPSD-209ENST00000470006 BCLAF3A2AJT9 711 aaKnown RBP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 SRRM3A6NNA2 597 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 TRDMT1O14717 391 aaKnown RBP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 KHNYNO15037 678 aaKnown RBP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 EPB41L2O43491 1005 aaKnown RBP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 CXCL8P10145 99 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 AVPR1AP37288 418 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 BFSP1Q12934 665 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 SAFBQ15424 915 aaKnown RBP eCLIP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 UAP1L1Q3KQV9 507 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 MGAT5BQ3V5L5 792 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 CC2D1AQ6P1N0 951 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 RPLP0P6Q8NHW5 317 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 EXOC4Q96A65 974 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 DRC1Q96MC2 740 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 SLC46A2Q9BY10 475 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 ARHGAP28Q9P2N2 729 aa20.61■□□□□ 0.89
NCKIPSD-209ENST00000470006 NUP205Q92621 2012 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 LNP1A1A4G5 178 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 TOM1L1O75674 476 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 APBB3O95704 486 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 CEACAM1P13688 526 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 DRD1P21728 446 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 U2AF2P26368 475 aaKnown RBP eCLIP20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 WEE1P30291 646 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 TUFMP49411 452 aaKnown RBP20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 GALK1P51570 392 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 DGKEP52429 567 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 ANKRD1Q15327 319 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 CMTM8Q8IZV2 173 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 TTC16Q8NEE8 873 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 GIPC2Q8TF65 315 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 ZCCHC14Q8WYQ9 949 aaKnown RBP20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 HPS4Q9NQG7 708 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 LRWD1Q9UFC0 647 aa20.6■□□□□ 0.89
NCKIPSD-209ENST00000470006 AKAP13Q12802 2813 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 SFI1A8K8P3 1242 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 ABLIM1O14639 778 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 CLDN3O15551 220 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 LARGE1O95461 756 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 LRPAP1P30533 357 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 GUCY1B3Q02153 619 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 SLC39A12Q504Y0 691 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 KIAA1211LQ6NV74 962 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 MAB21L3Q8N8X9 362 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 P2RY13Q9BPV8 354 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 FAM83CQ9BQN1 747 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 FBRSL1Q9HCM7 1045 aaKnown RBP20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 UBQLN1Q9UMX0 589 aaKnown RBP20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 LHX6Q9UPM6 363 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 DNM3Q9UQ16 869 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 THADAQ6YHU6 1953 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 ABCA7Q8IZY2 2146 aa20.59■□□□□ 0.89
NCKIPSD-209ENST00000470006 PKD1L2Q7Z442 2459 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 OTOL1A6NHN0 477 aaPredicted RBP20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 XPOTO43592 962 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 ODC1P11926 461 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 ARSAP15289 507 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 TYMPP19971 482 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 GUCY2FP51841 1108 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms