RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PPP1R37O75864 691 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 IDEP14735 1019 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 GABRR2P28476 465 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 TXLNAP40222 546 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 TUFMP49411 452 aaKnown RBP14.35□□□□□ -0.11
CPSF4-210ENST00000469897 TAF6P49848 677 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 MGAT5BQ3V5L5 792 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 SCARA3Q6AZY7 606 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 EFCAB13Q8IY85 973 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 TTC8Q8TAM2 541 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 GIPC2Q8TF65 315 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 RUBCNQ92622 972 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 E2F7Q96AV8 911 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 SAAL1Q96ER3 474 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 ACCSQ96QU6 501 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 LPIN3Q9BQK8 851 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 MKNK1Q9BUB5 465 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 SEL1LQ9UBV2 794 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 EXOC7Q9UPT5 735 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 GOLGA8IPA6NC78 632 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 GOLGA8JA6NMD2 632 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 DPYSL4O14531 572 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 GCNT3O95395 438 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 GAP43P17677 238 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 CASP5P51878 434 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 WNT7BP56706 349 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 TFAMQ00059 246 aaKnown RBP14.34□□□□□ -0.11
CPSF4-210ENST00000469897 POU5F1Q01860 360 aaKnown RBP14.34□□□□□ -0.11
CPSF4-210ENST00000469897 SLC39A14Q15043 492 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 L1TD1Q5T7N2 865 aaKnown RBP14.34□□□□□ -0.11
CPSF4-210ENST00000469897 GPR158Q5T848 1215 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 ITIH5Q86UX2 942 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 SYCP3Q8IZU3 236 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 ZBTB44Q8NCP5 570 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 CSGALNACT1Q8TDX6 532 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 USP28Q96RU2 1077 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 PCIF1Q9H4Z3 704 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 ZSCAN32Q9NX65 697 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 HSFX1Q9UBD0 423 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
CPSF4-210ENST00000469897 A0A087X0B3 334 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 SLC38A8A6NNN8 435 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 ARNTLO00327 626 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 CHADO15335 359 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 IL18RAPO95256 599 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 ATF6P18850 670 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 SOX9P48436 509 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 KPNA1P52294 538 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-210ENST00000469897 CYP4F8P98187 520 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 TAF12Q16514 161 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 SV2CQ496J9 727 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 ARHGAP15Q53QZ3 475 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 PDILTQ8N807 584 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 NOC3LQ8WTT2 800 aaKnown RBP14.33□□□□□ -0.12
CPSF4-210ENST00000469897 NELL1Q92832 810 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 ZFYVE19Q96K21 471 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 SLC46A2Q9BY10 475 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 FGFBP2Q9BYJ0 223 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 SMG9Q9H0W8 520 aaKnown RBP14.33□□□□□ -0.12
CPSF4-210ENST00000469897 TASP1Q9H6P5 420 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 PANK4Q9NVE7 773 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 TMLHEQ9NVH6 421 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 AGAP1Q9UPQ3 857 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 PCDHGA2Q9Y5H1 932 aa14.33□□□□□ -0.12
CPSF4-210ENST00000469897 DOCK8Q8NF50 2099 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 PRPF6O94906 941 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 FGF19O95750 216 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 LDHAP00338 332 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 ITGB3P05106 788 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 HAPLN1P10915 354 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 CHRNB1P11230 501 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 STAT6P42226 847 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 FOXK2Q01167 660 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 FCHO2Q0JRZ9 810 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 VEPH1Q14D04 833 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 NT5DC4Q86YG4 428 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 DCP1BQ8IZD4 617 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 CSGALNACT2Q8N6G5 542 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 CACTINQ8WUQ7 758 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 RMDN1Q96DB5 314 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 FAM84AQ96KN4 292 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 CBWD1Q9BRT8 395 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 CHRDQ9H2X0 955 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 ZSCAN16Q9H4T2 348 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 IL21Q9HBE4 155 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 RBM12Q9NTZ6 932 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 ABI2Q9NYB9 513 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 GTSE1Q9NYZ3 720 aa14.32□□□□□ -0.12
CPSF4-210ENST00000469897 TFIP11Q9UBB9 837 aaKnown RBP14.32□□□□□ -0.12
CPSF4-210ENST00000469897 NOTCH4Q99466 2003 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 LILRB5O75023 590 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 GARTP22102 1010 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 POLR2BP30876 1174 aaKnown RBP14.31□□□□□ -0.12
CPSF4-210ENST00000469897 MLLT6P55198 1093 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-210ENST00000469897 SMARCB1Q12824 385 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 GAS6Q14393 721 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms