RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 VIRMAQ69YN4 1812 aaKnown RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MAPRE1Q15691 268 aaKnown RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 CHMP6Q96FZ7 201 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 ASB7Q9H672 318 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MLXIPLQ9NP71 852 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 UBN1Q9NPG3 1134 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 KPNA7A9QM74 516 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 AP3B1O00203 1094 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 BNIP3LO60238 219 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 PPP1R11O60927 126 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 PPP1R37O75864 691 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 SPATA31C1P0DKV0 1188 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 CXCL8P10145 99 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 THPOP40225 353 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 BEND6Q5SZJ8 279 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 ABRAQ8N0Z2 381 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 PORCNQ9H237 461 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 TJP2Q9UDY2 1190 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 NFASCO94856 1347 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 ZBBXA8MT70 800 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 ZNF286BP0CG31 522 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 TAC1P20366 129 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 GTF2BQ00403 316 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 GRIK4Q16099 956 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 SNCBQ16143 134 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 TADA2BQ86TJ2 420 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 BRSK2Q8IWQ3 736 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 NUF2Q9BZD4 464 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 SETD4Q9NVD3 440 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 HSPA4LO95757 839 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 ESRRAP11474 423 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 RECQLP46063 649 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 TMEM132BQ14DG7 1078 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 MUM1Q2TAK8 710 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 C2CD6Q53TS8 623 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 MYLK4Q86YV6 388 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-203ENST00000467558 ANKMY2Q8IV38 441 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 PNKPQ96T60 521 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 FAM96AQ9H5X1 160 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 ZFATQ9P243 1243 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 PLIN4Q96Q06 1357 aa14.47□□□□□ -0.09
BRAT1-203ENST00000467558 RGPD1P0DJD0 1748 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 A0A0G2JND7 137 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 B3GAT3O94766 335 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 PROSCO94903 275 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 BAG2O95816 211 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 PTPN11Q06124 597 aaPredicted RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 BIRC2Q13490 618 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 CLEC16AQ2KHT3 1053 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 NLRP14Q86W24 1093 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 SLC9A9Q8IVB4 645 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 CEP120Q8N960 986 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 IL31RAQ8NI17 732 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 BTBD6Q96KE9 485 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 OSMRQ99650 979 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 TRPV6Q9H1D0 765 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 F8W8V4 182 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 TXNDC9O14530 226 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 STIP1P31948 543 aaKnown RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 HSPA9P38646 679 aaKnown RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 SESN2P58004 480 aaPredicted RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 PDK1Q15118 436 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 C11orf63Q6NUN7 778 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 HIBCHQ6NVY1 386 aaPredicted RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 TRPM4Q8TD43 1214 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 CPB2Q96IY4 423 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 ROPN1BQ9BZX4 212 aaPredicted RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 ROPN1Q9HAT0 212 aaPredicted RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 EEF2KO00418 725 aaKnown RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 PJA2O43164 708 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 DBN1Q16643 649 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 CBWD6Q4V339 395 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 CBWD3Q5JTY5 395 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 CBWD5Q5RIA9 395 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 C4orf22Q6V702 233 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 SH2D3CQ8N5H7 860 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 PCSK9Q8NBP7 692 aaKnown RBP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 FAM118BQ9BPY3 351 aa14.46□□□□□ -0.09
BRAT1-203ENST00000467558 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.46□□□□□ -0.09
BRAT1-203ENST00000467558 C3orf70A6NLC5 250 aaPredicted RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 DFFAO00273 331 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 CSDE1O75534 798 aaKnown RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 H2AFXP16104 143 aaPredicted RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 TYK2P29597 1187 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 OR1G1P47890 313 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 ITGA8P53708 1063 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 SHROOM1Q2M3G4 852 aaPredicted RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF710Q8N1W2 664 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 SLC7A14Q8TBB6 771 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 RIN2Q8WYP3 895 aaPredicted RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 TMEM176AQ96HP8 235 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 ZIM3Q96PE6 472 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 TGS1Q96RS0 853 aaKnown RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms