RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	EPHA5	P54756	1037 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	STARD6	P59095	220 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	UBE2H	P62256	183 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	POU5F1	Q01860	360 aa	Known RBP	13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	SNW1	Q13573	536 aa	Known RBP	13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	ISM2	Q6H9L7	571 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	POTEH	Q6S545	545 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	DSTYK	Q6XUX3	929 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	CBWD2	Q8IUF1	395 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	BRSK2	Q8IWQ3	736 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	GOLGA5	Q8TBA6	731 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	GBP4	Q96PP9	640 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	ASB7	Q9H672	318 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	DERA	Q9Y315	318 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	MRPS23	Q9Y3D9	190 aa	Known RBP	13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	PRR23A	A6NEV1	266 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	PRRG1	O14668	218 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	TGFB1I1	O43294	461 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	CALU	O43852	315 aa	Predicted RBP	13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	RHOBTB3	O94955	611 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	VNN2	O95498	520 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	DLAT	P10515	647 aa	Known RBP	13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	CEBPB	P17676	345 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	PTPN2	P17706	415 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	TYMP	P19971	482 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	ELF1	P32519	619 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	HOXD13	P35453	343 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	ARPP19	P56211	112 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	GPC5	P78333	572 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	ANGPT1	Q15389	498 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	BMT2	Q1RMZ1	405 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	SPATA1	Q5VX52	437 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	XXYLT1	Q8NBI6	393 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	ENGASE	Q8NFI3	743 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	CCDC127	Q96BQ5	260 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	ANKRD36BP1	Q96IX9	119 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	FNBP1	Q96RU3	617 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	CYP4F11	Q9HBI6	524 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	PDE11A	Q9HCR9	933 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	DPP3	Q9NY33	737 aa		13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	PTPRZ1	P23471	2315 aa	Predicted RBP	13.71	□□□□□ -0.21
FDPS-204	ENST00000461507	CACNA1I	Q9P0X4	2223 aa		13.71	□□□□□ -0.22
FDPS-204	ENST00000461507	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	GOLGA6L22	H0YM25	854 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	TNNC2	P02585	160 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	TNNI1	P19237	187 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	FCAR	P24071	287 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	PFKP	Q01813	784 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	PRKCQ	Q04759	706 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	YWHAH	Q04917	246 aa	Predicted RBP	13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	ADCY1	Q08828	1119 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	KCNB1	Q14721	858 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	SNRNP35	Q16560	246 aa	Known RBP	13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	CEP135	Q66GS9	1140 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	EFCAB13	Q8IY85	973 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	LEMD2	Q8NC56	503 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	PJA1	Q8NG27	643 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	CACTIN	Q8WUQ7	758 aa	Known RBP	13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	ING5	Q8WYH8	240 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	SHD	Q96IW2	340 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	FAM84A	Q96KN4	292 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	TIGD1	Q96MW7	591 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	KXD1	Q9BQD3	176 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	MTMR12	Q9C0I1	747 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	KIAA1586	Q9HCI6	787 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	CEP72	Q9P209	647 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	CGN	Q9P2M7	1197 aa	Known RBP	13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	C2CD2	Q9Y426	696 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	DMD	P11532	3685 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	F5	P12259	2224 aa		13.7	□□□□□ -0.22
FDPS-204	ENST00000461507	ANO9	A1A5B4	782 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	OR6C75	A6NL08	312 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	BIN1	O00499	593 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	PIR	O00625	290 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	ZNF197	O14709	1029 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	PPEF2	O14830	753 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	MOSPD3	O75425	235 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	ITGB3	P05106	788 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	CPB1	P15086	417 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	POLR2B	P30876	1174 aa	Known RBP	13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	CCR2	P41597	374 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	WNT7B	P56706	349 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	LILRA4	P59901	499 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	SNRPF	P62306	86 aa	Known RBP	13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	BFSP1	Q12934	665 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	GPR17	Q13304	367 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	MYBPC2	Q14324	1141 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	MLF2	Q15773	248 aa	Predicted RBP	13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	CAMK4	Q16566	473 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	C9orf57	Q5W0N0	161 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	ASCL5	Q7RTU5	278 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	FRMD5	Q7Z6J6	570 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	USP37	Q86T82	979 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	DNASE1L2	Q92874	299 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	ELSPBP1	Q96BH3	223 aa		13.69	□□□□□ -0.22
FDPS-204	ENST00000461507	ZNF560	Q96MR9	790 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms