RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 TCF15Q12870 199 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 GDF7Q7Z4P5 450 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 SKAP1Q86WV1 359 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 CFAP52Q8N1V2 620 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 PAF1Q8N7H5 531 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 CPT1CQ8TCG5 803 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 UBE2Q2Q8WVN8 375 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 EXTL1Q92935 676 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 CDK5RAP1Q96SZ6 601 aaKnown RBP6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 MYD88Q99836 296 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 C1QTNF3Q9BXJ4 246 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 TEX101Q9BY14 249 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 TINAGL1Q9GZM7 467 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 SIK2Q9H0K1 926 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 STK32BQ9NY57 414 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 HSFX1Q9UBD0 423 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
HMGB1P26-201ENST00000452520 RPS6KA4O75676 772 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 UNC5CO95185 931 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SETSIPP0DME0 302 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 FDXRP22570 491 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 MXRA7P84157 204 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 EFEMP1Q12805 493 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 CTBP1Q13363 440 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 CDSNQ15517 529 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 AMOTQ4VCS5 1084 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZNF783Q6ZMS7 281 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SESTD1Q86VW0 696 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 C1orf210Q8IVY1 113 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 PALM2Q8IXS6 379 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 CPXCR1Q8N123 301 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 NME8Q8N427 588 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 LRIG1Q96JA1 1093 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SENP7Q9BQF6 1050 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 HERPUD2Q9BSE4 406 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZNF703Q9H7S9 590 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SMURF2Q9HAU4 748 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SACM1LQ9NTJ5 587 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 MRPS18AQ9NVS2 196 aaKnown RBP6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 FNIP2Q9P278 1114 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SRRDQ9UH36 339 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 PLEKHM1Q9Y4G2 1056 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 SNX13Q9Y5W8 968 aa6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 MORC2Q9Y6X9 1032 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P26-201ENST00000452520 F5H423 210 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 KIF20AO95235 890 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 SPATA31D3P0C874 917 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZNF20P17024 532 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZKSCAN1P17029 563 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 FGFR4P22455 802 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 TM4SF4P48230 202 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 POU6F2P78424 691 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZNF844Q08AG5 666 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 SLC13A2Q13183 592 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 IFIT5Q13325 482 aaKnown RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 KRT72Q14CN4 511 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 USP39Q53GS9 565 aaKnown RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 C3orf38Q5JPI3 329 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 FAM160B1Q5W0V3 765 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 SPATA31D4Q6ZUB0 917 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 MAPKAPK5Q8IW41 473 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 NSUN7Q8NE18 718 aaKnown RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 NMD3Q96D46 503 aaKnown RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 MED15Q96RN5 788 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZSWIM1Q9BR11 485 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 CNPPD1Q9BV87 410 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 ZNF768Q9H5H4 540 aaKnown RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 PARPBPQ9NWS1 579 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 CEP72Q9P209 647 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 AFF4Q9UHB7 1163 aaKnown RBP6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 CDYLQ9Y232 598 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 TSC22D4Q9Y3Q8 395 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 FPGT-TNNI3KV9GXZ4 949 aa6.09□□□□□ -1.43
HMGB1P26-201ENST00000452520 M0QYG6 137 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 FOXN3O00409 490 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 POLRMTO00411 1230 aaKnown RBP6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 FAM20BO75063 409 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 GPANK1O95872 356 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 GRPP07492 148 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 ELANEP08246 267 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 PIM1P11309 404 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 SLC11A2P49281 568 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 PPM1FP49593 454 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 PRIM2P49643 509 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 UCP3P55916 312 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 ADAM17P78536 824 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 HSD11B2P80365 405 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 FAM189BP81408 668 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 OCA2Q04671 838 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 PIGFQ07326 219 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 FOXD4Q12950 439 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 SPDYAQ5MJ70 313 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 LMBRD2Q68DH5 695 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 FOXR2Q6PJQ5 311 aa6.08□□□□□ -1.44
HMGB1P26-201ENST00000452520 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms