RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 SHBGP04278 402 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 MMP8P22894 467 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 SLC26A2P50443 739 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 MYL6P60660 151 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 DENND2CQ68D51 928 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 HOOK3Q86VS8 718 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 TLCD1Q96CP7 247 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 CDCA5Q96FF9 252 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 MAN1A1P33908 653 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 SGSM1Q2NKQ1 1148 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 DAB2IPQ5VWQ8 1189 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 NIF3L1Q9GZT8 377 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 PARVAQ9NVD7 372 aa17.22■□□□□ 0.35
PIKFYVE-206ENST00000443896 HOXC6P09630 235 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 PPP2R2AP63151 447 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 KRT17Q04695 432 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 KLF1Q13351 362 aaPredicted RBP17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 SLMAPQ14BN4 828 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 SYDE1Q6ZW31 735 aaPredicted RBP17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 RHPN2Q8IUC4 686 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 KATNAL2Q8IYT4 538 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 SH3GL3Q99963 347 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 DCLK3Q9C098 648 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 FZD8Q9H461 694 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 WHRNQ9P202 907 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 GGT7Q9UJ14 662 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 ACKR2O00590 384 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 TAS2R40P59535 323 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 MAGOHP61326 146 aaKnown RBP17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 SMYD5Q6GMV2 418 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 FEZF2Q8TBJ5 459 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 SEMA4AQ9H3S1 761 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 MROH8Q9H579 483 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
PIKFYVE-206ENST00000443896 DCDC2CA8MYV0 355 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 O00370 1275 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 TP73O15350 636 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 LSM8O95777 96 aaKnown RBP17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 RARGP13631 454 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 OSBPP22059 807 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 SLC29A2Q14542 456 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 ODF2Q5BJF6 829 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 TLDC1Q6P9B6 456 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 COPS5Q92905 334 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 CISHQ9NSE2 258 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 ADCY2Q08462 1091 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 CALCOCO2Q13137 446 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 TFDP1Q14186 410 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 CAPRIN2Q6IMN6 1127 aaKnown RBP17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 TRAPPC12Q8WVT3 735 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 ATG4AQ8WYN0 398 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 HBP1O60381 514 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 RALAP11233 206 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 PTK6Q13882 451 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 ATF7IP2Q5U623 682 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 GRK7Q8WTQ7 553 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 PGM2Q96G03 612 aa17.2■□□□□ 0.34
PIKFYVE-206ENST00000443896 B4GALT4O60513 344 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TRPC3Q13507 836 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 EXD1Q8NHP7 514 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 XYLT2Q9H1B5 865 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 NOD2Q9HC29 1040 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 HOMER3Q9NSC5 361 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 IP6K2Q9UHH9 426 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TCRBV5S1A1TA0A578 114 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 RIPK2O43353 540 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 CALB1P05937 261 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 GJB1P08034 283 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 CD58P19256 250 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TFAMQ00059 246 aaKnown RBP17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 ZNF568Q3ZCX4 644 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TMEM63BQ5T3F8 832 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TBC1D1Q86TI0 1168 aaPredicted RBP17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 NLRP4Q96MN2 994 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TMEM109Q9BVC6 243 aa17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 R3HDM2Q9Y2K5 976 aaKnown RBP17.19■□□□□ 0.34
PIKFYVE-206ENST00000443896 TMEM191CA6NGB0 347 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 GJB6O95452 261 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 TMEM191BP0C7N4 346 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 IVDP26440 423 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 SSR1P43307 286 aaKnown RBP17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 SCTRP47872 440 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 BYSLQ13895 437 aaKnown RBP17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 RHBDF2Q6PJF5 856 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 CCDC50Q8IVM0 306 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 MCM3APO60318 1980 aa17.18■□□□□ 0.34
PIKFYVE-206ENST00000443896 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms