RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 DCP1BQ8IZD4 617 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 SLITRK1Q96PX8 696 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 AXIN2Q9Y2T1 843 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 UBE2Q2LH0YL09 131 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 ERVK-10P10266 1014 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 TRIM69Q86WT6 500 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 SPATA18Q8TC71 538 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 HPDLQ96IR7 371 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 OSBPL5Q9H0X9 879 aaPredicted RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 LIMA1Q9UHB6 759 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 FLT1P17948 1338 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 H2AFYO75367 372 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 HSPA9P38646 679 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 GUCY1A3Q02108 690 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 XKR3Q5GH77 459 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 ZKSCAN4Q969J2 545 aaPredicted RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 VTNP04004 478 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 POU4F1Q01851 419 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 ZNF177Q13360 481 aaPredicted RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 GPAT2Q6NUI2 795 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 APEX2Q9UBZ4 518 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 SRP72O76094 671 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 CDC42EP5Q6NZY7 148 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 OTOAQ7RTW8 1153 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 MIB1Q86YT6 1006 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 SGF29Q96ES7 293 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 CALR3Q96L12 384 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 WDCPQ9H6R7 721 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 CLASP2O75122 1294 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 NDUFB10O96000 172 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 FAM200BP0CF97 657 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 MTF1Q14872 753 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 PRR23CQ6ZRP0 262 aa14.38□□□□□ -0.11
LRCH3-206ENST00000438796 STN1Q9H668 368 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 PPIEQ9UNP9 301 aaKnown RBP14.38□□□□□ -0.11
LRCH3-206ENST00000438796 APOA1P02647 267 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 KLK7P49862 253 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 STX3Q13277 289 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 KCTD10Q9H3F6 313 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 RPS7P62081 194 aaKnown RBP14.37□□□□□ -0.11
LRCH3-206ENST00000438796 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
LRCH3-206ENST00000438796 HIST2H2ACQ16777 129 aaPredicted RBP14.37□□□□□ -0.11
LRCH3-206ENST00000438796 FAXCQ5TGI0 409 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 E4F1Q66K89 784 aaPredicted RBP14.37□□□□□ -0.11
LRCH3-206ENST00000438796 HIST2H2AA3Q6FI13 130 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 LONP2Q86WA8 852 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 SMARCAL1Q9NZC9 954 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.37□□□□□ -0.11
LRCH3-206ENST00000438796 CAND2O75155 1236 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 DAB1O75553 588 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 CYP7B1O75881 506 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 CEP78Q5JTW2 689 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 ATL2Q8NHH9 583 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 TMEM169Q96HH4 297 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 USP27XA6NNY8 438 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 F8W810 466 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 GYS1P13807 737 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 CUL4AQ13619 759 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 C3orf62Q6ZUJ4 267 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 FHOD1Q9Y613 1164 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 SPATA31A3Q5VYP0 1347 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 PCDH8O95206 1070 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 CETPP11597 493 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 TCF7P36402 384 aaPredicted RBP14.37□□□□□ -0.11
LRCH3-206ENST00000438796 TRIM10Q9UDY6 481 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 NEU2Q9Y3R4 380 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 SYNMO15061 1565 aa14.37□□□□□ -0.11
LRCH3-206ENST00000438796 ODC1P11926 461 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 PTK7Q13308 1070 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 POLD3Q15054 466 aaPredicted RBP14.36□□□□□ -0.11
LRCH3-206ENST00000438796 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 FAM71DQ8N9W8 422 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 COPS7BQ9H9Q2 264 aaPredicted RBP14.36□□□□□ -0.11
LRCH3-206ENST00000438796 GPC1P35052 558 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 TRIP4Q15650 581 aaPredicted RBP14.36□□□□□ -0.11
LRCH3-206ENST00000438796 MROH9Q5TGP6 573 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 ARHGAP17Q68EM7 881 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 GJB7Q6PEY0 223 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 THTPAQ9BU02 230 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 TMEM245Q9H330 911 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 CHST12Q9NRB3 414 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 STOML1Q9UBI4 398 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 GRID2IPA4D2P6 1211 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 CFAP99D6REC4 459 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 GRIN3BO60391 1043 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 TOMM20Q15388 145 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 C9orf72Q96LT7 481 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 PRR12Q9ULL5 1215 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 RNF112Q9ULX5 631 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 FAM187AA6NFU0 413 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 FGFR1P11362 822 aa14.36□□□□□ -0.11
LRCH3-206ENST00000438796 GPD1P21695 349 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms