RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 RHPN2Q8IUC4 686 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 SHKBP1Q8TBC3 707 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 JDP2Q8WYK2 163 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 GATA6Q92908 595 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 FNBP1Q96RU3 617 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 TUFT1Q9NNX1 390 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 SEL1LQ9UBV2 794 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 LNPEPQ9UIQ6 1025 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 IGLV3-22A0A075B6J6 115 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 DNALI1O14645 258 aaPredicted RBP17.52■□□□□ 0.39
PKP4-204ENST00000421462 ATP2A1O14983 1001 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 ECE2O60344 883 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 STK10O94804 968 aaKnown RBP17.52■□□□□ 0.39
PKP4-204ENST00000421462 GSTA2P09210 222 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 ZYXQ15942 572 aaKnown RBP17.52■□□□□ 0.39
PKP4-204ENST00000421462 SLC15A2Q16348 729 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 ZFAND2BQ8WV99 257 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 IFT43Q96FT9 208 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 ACCSQ96QU6 501 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 PAFAH2Q99487 392 aa17.52■□□□□ 0.39
PKP4-204ENST00000421462 STX18Q9P2W9 335 aaKnown RBP17.52■□□□□ 0.39
PKP4-204ENST00000421462 NDUFB10O96000 172 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 KLRC2P26717 231 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 SCNN1BP51168 640 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 C1orf146Q5VVC0 180 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 SPOPLQ6IQ16 392 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 CENPUQ71F23 418 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
PKP4-204ENST00000421462 PTCD3Q96EY7 689 aaKnown RBP17.51■□□□□ 0.39
PKP4-204ENST00000421462 SMYD3Q9H7B4 428 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 MEI4A8MW99 385 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 LPXNO60711 386 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 PSMD10O75832 226 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 SPATA31D3P0C874 917 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 CENPCQ03188 943 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 ALCAMQ13740 583 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 RASA2Q15283 850 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 KRT39Q6A163 491 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 SPATA31D4Q6ZUB0 917 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 RHOT1Q8IXI2 618 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 PALM2Q8IXS6 379 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 HELQQ8TDG4 1101 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 NMD3Q96D46 503 aaKnown RBP17.51■□□□□ 0.39
PKP4-204ENST00000421462 TRAPPC9Q96Q05 1148 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 CYLDQ9NQC7 956 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 CDK5RAP2Q96SN8 1893 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 A6NJR5 290 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
PKP4-204ENST00000421462 KRT1P04264 644 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 GEMIN4P57678 1058 aaKnown RBP17.51■□□□□ 0.39
PKP4-204ENST00000421462 KLF1Q13351 362 aaPredicted RBP17.51■□□□□ 0.39
PKP4-204ENST00000421462 CDC42EP5Q6NZY7 148 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 MFSD7Q6UXD7 560 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 MECRQ9BV79 373 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 SHCBP1LQ9BZQ2 653 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 TLE6Q9H808 572 aa17.51■□□□□ 0.39
PKP4-204ENST00000421462 CCDC160A6NGH7 325 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 ARHGAP42A6NI28 874 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 GRIN3BO60391 1043 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 NRLP54845 237 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 ALDH18A1P54886 795 aaKnown RBP17.5■□□□□ 0.39
PKP4-204ENST00000421462 SOX10P56693 466 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 GPX6P59796 221 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 NFX1Q12986 1120 aaKnown RBP17.5■□□□□ 0.39
PKP4-204ENST00000421462 MSS51Q4VC12 460 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 FAM102BQ5T8I3 360 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 RIPOR1Q6ZS17 1223 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.5■□□□□ 0.39
PKP4-204ENST00000421462 FAM81AQ8TBF8 368 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 DDX1Q92499 740 aaKnown RBP17.5■□□□□ 0.39
PKP4-204ENST00000421462 RAB20Q9NX57 234 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 GAKO14976 1311 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 G3V3G9 751 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 SLC26A4O43511 780 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 MT-ND3P03897 115 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 HIF1AQ16665 826 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 ANKRD22Q5VYY1 191 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 NLRX1Q86UT6 975 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 TAF1LQ8IZX4 1826 aa17.5■□□□□ 0.39
PKP4-204ENST00000421462 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
PKP4-204ENST00000421462 E5RJQ4 531 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 PYGBP11216 843 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 ANPEPP15144 967 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 GLRA2P23416 452 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 RPL7AP62424 266 aaKnown RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 IRX4P78413 519 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CDK16Q00536 496 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 DSG1Q02413 1049 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 TCEAL1Q15170 157 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 NFIL3Q16649 462 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 FBXL13Q8NEE6 735 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 PYDC1Q8WXC3 89 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CCDC124Q96CT7 223 aaKnown RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 RILPQ96NA2 401 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 TTC25Q96NG3 672 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 NDE1Q9NXR1 346 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms