RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ALG13Q9NP73 1137 aaKnown RBP9.55□□□□□ -0.88
BRCC3-206ENST00000399042 ZNHIT6Q9NWK9 470 aaKnown RBP9.55□□□□□ -0.88
BRCC3-206ENST00000399042 SSX2IPQ9Y2D8 614 aa9.55□□□□□ -0.88
BRCC3-206ENST00000399042 LUC7L2Q9Y383 392 aaKnown RBP9.55□□□□□ -0.88
BRCC3-206ENST00000399042 ARIH1Q9Y4X5 557 aaPredicted RBP9.55□□□□□ -0.88
BRCC3-206ENST00000399042 LTBP2Q14767 1821 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 A0A1W2PPC1 479 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TMEM189-UBE2V1I3L0A0 370 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 SYN3O14994 580 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 LRRN2O75325 713 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 STAU1O95793 577 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 UCHL3P15374 230 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PCSK1P29120 753 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 STAT1P42224 750 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 GLUD2P49448 558 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 CDH8P55286 799 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TSPY1Q01534 308 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 GCNT1Q02742 428 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TAP1Q03518 808 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 ARID5AQ03989 594 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 KCNMA1Q12791 1236 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TRIM14Q14142 442 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 CTXN3Q4LDR2 81 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 SCARA3Q6AZY7 606 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 IQCEQ6IPM2 695 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 ZNF280DQ6N043 979 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PHLDB3Q6NSJ2 640 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PDXDC1Q6P996 788 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TMEM270Q6UE05 265 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 DDX53Q86TM3 631 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 FMNL3Q8IVF7 1028 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 ARHGEF19Q8IW93 802 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PDCL2Q8N4E4 241 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 TNIP3Q96KP6 325 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 SUSD3Q96L08 255 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 HEXIM2Q96MH2 286 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 GPR62Q9BZJ7 368 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PLCB1Q9NQ66 1216 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 MRPL17Q9NRX2 175 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 CISHQ9NSE2 258 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 GDAP2Q9NXN4 497 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
BRCC3-206ENST00000399042 DAAM1Q9Y4D1 1078 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 FHOD1Q9Y613 1164 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 PDE4DIPQ5VU43 2346 aa9.54□□□□□ -0.88
BRCC3-206ENST00000399042 MICAL3Q7RTP6 2002 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 FSD2A1L4K1 749 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 M0QZQ0 153 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 CXCL14O95715 111 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 SOD2P04179 222 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 CPB1P15086 417 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 CD19P15391 556 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 TYMPP19971 482 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 IGFBP6P24592 240 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 ASPAP45381 313 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 BPIFB4P59827 614 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 ERVK-21P61565 698 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 CREMQ03060 361 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 DRAP1Q14919 205 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 PTPROQ16827 1216 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 SOWAHAQ2M3V2 549 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 SFMBT2Q5VUG0 894 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 ANKS3Q6ZW76 656 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 TMEM173Q86WV6 379 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 LMO3Q8TAP4 145 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 CXorf38Q8TB03 319 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 FAXDC2Q96IV6 333 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 ARID3AQ99856 593 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 TCF25Q9BQ70 676 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 MRPL45Q9BRJ2 306 aaKnown RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 NT5C1AQ9BXI3 368 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 STK33Q9BYT3 514 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 CEP72Q9P209 647 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 BARX2Q9UMQ3 279 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-206ENST00000399042 L1RE1Q9UN81 338 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 SIK3Q9Y2K2 1263 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 ITIH6Q6UXX5 1313 aa9.53□□□□□ -0.88
BRCC3-206ENST00000399042 AKR1B15C9JRZ8 316 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-206ENST00000399042 DPYSL4O14531 572 aa9.52□□□□□ -0.89
BRCC3-206ENST00000399042 AP5Z1O43299 807 aa9.52□□□□□ -0.89
BRCC3-206ENST00000399042 NRDCO43847 1150 aa9.52□□□□□ -0.89
BRCC3-206ENST00000399042 TACC1O75410 805 aa9.52□□□□□ -0.89
BRCC3-206ENST00000399042 GFPT2O94808 682 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms