RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 TSC2P49815 1807 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 P4HA1P13674 534 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 ELF1P32519 619 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 MYL7Q01449 175 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 CBWD6Q4V339 395 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 HSP90AA4PQ58FG1 418 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 CBWD3Q5JTY5 395 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 CBWD5Q5RIA9 395 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 LIN9Q5TKA1 542 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 DPH6Q7L8W6 267 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 FAM114A1Q8IWE2 563 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 C12orf76Q8N812 135 aaPredicted RBP31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 TAF4BQ92750 862 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 THAP9Q9H5L6 903 aa31.5■■■□□ 2.63
CHCHD4-202ENST00000396914 WDR27A2RRH5 827 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 HOXB8P17481 243 aaPredicted RBP31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 MTIF2P46199 727 aaKnown RBP31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 MCCD1P59942 119 aaPredicted RBP31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 NFKBIBQ15653 356 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 RARS2Q5T160 578 aaKnown RBP31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 SPOPLQ6IQ16 392 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 LILRA6Q6PI73 481 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 FBXL13Q8NEE6 735 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 ZNF461Q8TAF7 563 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 SNX25Q9H3E2 840 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 PLEKHA4Q9H4M7 779 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 SYCE3A1L190 88 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 LHX1P48742 406 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 MRPS5P82675 430 aaKnown RBP31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 LEXMQ3ZCV2 418 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 TRIM59Q8IWR1 403 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 OR10T2Q8NGX3 314 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 MSLNLQ96KJ4 702 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 PGLYRP2Q96PD5 576 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 TMEM209Q96SK2 561 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 RAB20Q9NX57 234 aa31.49■■■□□ 2.63
CHCHD4-202ENST00000396914 PRRG1O14668 218 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 C1RP00736 705 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 ASS1P00966 412 aaKnown RBP31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 FMO5P49326 533 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 MARSP56192 900 aaKnown RBP31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 TSPY1Q01534 308 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 WDR44Q5JSH3 913 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 OR6B3Q8NGW1 331 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 ATXN2LQ8WWM7 1075 aaKnown RBP31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 NAT10Q9H0A0 1025 aaKnown RBP31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 VRTNQ9H8Y1 702 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 SFXN1Q9H9B4 322 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 FBXW11Q9UKB1 542 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 NFE2L3Q9Y4A8 694 aa31.48■■■□□ 2.63
CHCHD4-202ENST00000396914 N4BP1O75113 896 aaKnown RBP31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 ACAT1P24752 427 aaKnown RBP31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 CDR1P51861 262 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 NOP14P78316 857 aaKnown RBP31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 ADCY1Q08828 1119 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 CETN1Q12798 172 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 ANO6Q4KMQ2 910 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 SLC39A12Q504Y0 691 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 TPGS2Q68CL5 300 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 CES5AQ6NT32 575 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 SYCE2Q6PIF2 218 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 TMC5Q6UXY8 1006 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 RNF19BQ6ZMZ0 732 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 OSTM1Q86WC4 334 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 ENOX1Q8TC92 643 aaKnown RBP31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 HDAC7Q8WUI4 952 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 SEMA4DQ92854 862 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 RTP3Q9BQQ7 232 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 MRPL45Q9BRJ2 306 aaKnown RBP31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 SMYD3Q9H7B4 428 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 CYP4F11Q9HBI6 524 aa31.47■■■□□ 2.63
CHCHD4-202ENST00000396914 AFPP02771 609 aaKnown RBP31.46■■■□□ 2.63
CHCHD4-202ENST00000396914 RAP1GAPP47736 663 aa31.46■■■□□ 2.63
CHCHD4-202ENST00000396914 KCNH2Q12809 1159 aa31.46■■■□□ 2.63
CHCHD4-202ENST00000396914 SLC7A14Q8TBB6 771 aa31.46■■■□□ 2.63
CHCHD4-202ENST00000396914 SPATA18Q8TC71 538 aa31.46■■■□□ 2.63
CHCHD4-202ENST00000396914 ABLIM3O94929 683 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 C8AP07357 584 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 PDGFRBP09619 1106 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 ATF2P15336 505 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 WARSP23381 471 aaKnown RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 PCSK1P29120 753 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 GNL1P36915 607 aaPredicted RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 KCNQ1P51787 676 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 GPR17Q13304 367 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 PPM1LQ5SGD2 360 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 PTCRAQ6ISU1 281 aaPredicted RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 CCDC149Q6ZUS6 474 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 IRF2BP1Q8IU81 584 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 DCP1BQ8IZD4 617 aaKnown RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 GADD45GIP1Q8TAE8 222 aaPredicted RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 KBTBD7Q8WVZ9 684 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 ZCWPW1Q9H0M4 648 aa31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 SAMSN1Q9NSI8 373 aaKnown RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 AFF4Q9UHB7 1163 aaKnown RBP31.45■■■□□ 2.63
CHCHD4-202ENST00000396914 XIRP2A4UGR9 3374 aa31.45■■■□□ 2.62
CHCHD4-202ENST00000396914 CCDC195A0A1B0GUA6 201 aa31.44■■■□□ 2.62
CHCHD4-202ENST00000396914 HCRTO43612 131 aa31.44■■■□□ 2.62
CHCHD4-202ENST00000396914 LRRN2O75325 713 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms