RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 NIPA2Q8N8Q9 360 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 C3orf20Q8ND61 904 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
TDP1-202ENST00000393452 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
TDP1-202ENST00000393452 NEU2Q9Y3R4 380 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 IVNS1ABPQ9Y6Y0 642 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 TRIP11Q15643 1979 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 H3BRB1 525 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 GJB6O95452 261 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 PAEPP09466 180 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ZNF286BP0CG31 522 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 RARGP13631 454 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ARF4P18085 180 aaPredicted RBP9.59□□□□□ -0.87
TDP1-202ENST00000393452 TMOD1P28289 359 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 KRT17Q04695 432 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 GRB14Q14449 540 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 SLMAPQ14BN4 828 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 LLGL1Q15334 1064 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 KYAT1Q16773 422 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 RHBDF2Q6PJF5 856 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 MTHFD1LQ6UB35 978 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 SCARA5Q6ZMJ2 495 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ARFGAP2Q8N6H7 521 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ATL2Q8NHH9 583 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 GRK7Q8WTQ7 553 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ATG4AQ8WYN0 398 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 OSBPL8Q9BZF1 889 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 SEMA4AQ9H3S1 761 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 TUT1Q9H6E5 874 aaKnown RBP9.59□□□□□ -0.87
TDP1-202ENST00000393452 SLC12A6Q9UHW9 1150 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 POLIQ9UNA4 740 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 R3HDM2Q9Y2K5 976 aaKnown RBP9.59□□□□□ -0.87
TDP1-202ENST00000393452 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 SRRM3A6NNA2 597 aaPredicted RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 CSDE1O75534 798 aaKnown RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 ATICP31939 592 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 MDH1P40925 334 aaKnown RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 RAD23BP54727 409 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 GSCP56915 257 aaPredicted RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 OGDHQ02218 1023 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 CALCOCO2Q13137 446 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 PDCLQ13371 301 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 PIGHQ14442 188 aaPredicted RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 PPP1R7Q15435 360 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 SLC10A6Q3KNW5 377 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 WDR72Q3MJ13 1102 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 KRT71Q3SY84 523 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 DUSP28Q4G0W2 176 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 MARCH8Q5T0T0 291 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 JADE1Q6IE81 842 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 DNAJC24Q6P3W2 148 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 GPR142Q7Z601 462 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 ERICH1Q86X53 443 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 RCOR2Q8IZ40 523 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 TLCD1Q96CP7 247 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 MAML3Q96JK9 1138 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 MCEEQ96PE7 176 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 LRRC4CQ9HCJ2 640 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 NXF1Q9UBU9 619 aaKnown RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 STRIP2Q9ULQ0 834 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 AKT3Q9Y243 479 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 CEP83Q9Y592 693 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 DOCK3Q8IZD9 2030 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 A0A1B0GUA9 196 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 GAS8O95995 478 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 VTNP04004 478 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 KRT19P08727 400 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 TCF4P15884 667 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 ITIH2P19823 946 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 LSP1P33241 339 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 FKBP1BP68106 108 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 NFX1Q12986 1120 aaKnown RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 SNX1Q13596 522 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 SLC29A2Q14542 456 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 PTPN20Q4JDL3 420 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 DENND2CQ68D51 928 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 CCDC50Q8IVM0 306 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 PGM2Q96G03 612 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 TMEM109Q9BVC6 243 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 SDCBP2Q9H190 292 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 FAM124BQ9H5Z6 455 aaPredicted RBP9.58□□□□□ -0.88
TDP1-202ENST00000393452 CYP3A43Q9HB55 503 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 AAASQ9NRG9 546 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 ZNF236Q9UL36 1845 aa9.58□□□□□ -0.88
TDP1-202ENST00000393452 F8VP50 259 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 MED7O43513 233 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 TSPAN1O60635 241 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 CILPO75339 1184 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 SHBGP04278 402 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 ITGB3P05106 788 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 MMP3P08254 477 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 SMPD1P17405 629 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 PTPN7P35236 360 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 GUCY1A3Q02108 690 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 IFFO1Q0D2I5 559 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 MAP1SQ66K74 1059 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms