RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 NUP85Q9BW27 656 aa18.28■□□□□ 0.52
LDLRAP1-201ENST00000374338 R3HDMLQ9H3Y0 253 aa18.28■□□□□ 0.52
LDLRAP1-201ENST00000374338 METTL5Q9NRN9 209 aaKnown RBP18.28■□□□□ 0.52
LDLRAP1-201ENST00000374338 INTUQ9ULD6 942 aa18.28■□□□□ 0.52
LDLRAP1-201ENST00000374338 ANKRD62A6NC57 917 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 SPOPO43791 374 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 MPP3Q13368 585 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 CCDC6Q16204 474 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 KHDC1Q4VXA5 237 aaKnown RBP18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 C1orf54Q8WWF1 131 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 ATG4AQ8WYN0 398 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 ZNF653Q96CK0 615 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 NAP1L3Q99457 506 aaPredicted RBP18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 BTNL10A8MVZ5 291 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 SLC26A4O43511 780 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 SP2Q02086 613 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 ACVR2BQ13705 512 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 SYCE1Q8N0S2 351 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 TMEM206Q9H813 350 aa18.27■□□□□ 0.52
LDLRAP1-201ENST00000374338 WDR46O15213 610 aaKnown RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 CBX6O95503 412 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 LMNAP02545 664 aaKnown RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 CCNFP41002 786 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 PSMC5P62195 406 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 CNTN2Q02246 1040 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 CETN1Q12798 172 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 CEP128Q6ZU80 1094 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZNF365Q70YC5 407 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 SV2AQ7L0J3 742 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 FAM83AQ86UY5 434 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 PRELID2Q8N945 189 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 FBXO41Q8TF61 875 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 ANKFY1Q9P2R3 1169 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 HNRNPRO43390 633 aaKnown RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 HOXA7P31268 230 aaPredicted RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 MCF2L2Q86YR7 1114 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 HEMGNQ9BXL5 484 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 KLHL11Q9NVR0 708 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 RBM47A0AV96 593 aaKnown RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 WDR64B1ANS9 1081 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZBED4O75132 1171 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 UBTFL6P0CB48 400 aaPredicted RBP18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 T-ENOLP0DO92 83 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 ETS2P15036 469 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 FMO1Q01740 532 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 DEUP1Q05D60 604 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 KIF22Q14807 665 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 HIC2Q96JB3 615 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 SLCO1B3Q9NPD5 702 aa18.26■□□□□ 0.51
LDLRAP1-201ENST00000374338 RBBP6Q7Z6E9 1792 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 CLDN3O15551 220 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 TBC1D12O60347 775 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 GPC5P78333 572 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 GTF2BQ00403 316 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 MTFR1Q15390 333 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 ANGEL2Q5VTE6 544 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 MFSD5Q6N075 450 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 CDR2LQ86X02 465 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 SRRM1Q8IYB3 904 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 ETNK2Q9NVF9 386 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 COMMD3-BMI1R4GMX3 469 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 TMCC1O94876 653 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZCCHC18P0CG32 403 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 BRAFP15056 766 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 CYP11B1P15538 503 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 TNNI1P19237 187 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 PTGIRP43119 386 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 CCDC137Q6PK04 289 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 CDC42EP4Q9H3Q1 356 aaKnown RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 RGS17Q9UGC6 210 aaPredicted RBP18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 LNPEPQ9UIQ6 1025 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 CHKBQ9Y259 395 aa18.25■□□□□ 0.51
LDLRAP1-201ENST00000374338 hCG_2014768A0A024R1R8 64 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 TTLL13PA6NNM8 815 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 NFKBIEO00221 500 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 CETPP11597 493 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 FOXN2P32314 431 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 STX2P32856 288 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 CHKAP35790 457 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 TMEM132BQ14DG7 1078 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 SETDB1Q15047 1291 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZNF394Q53GI3 561 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 CCDC105Q8IYK2 499 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 AGBL3Q8NEM8 1001 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZNF564Q8TBZ8 553 aaPredicted RBP18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 IQCGQ9H095 443 aaKnown RBP18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 NOCTQ9UK39 431 aaKnown RBP18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 PTPRJQ12913 1337 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 HERPUD2Q9BSE4 406 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 TBC1D22BQ9NU19 505 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 HSFX1Q9UBD0 423 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 RPL26L1Q9UNX3 145 aaKnown RBP18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 USTQ9Y2C2 406 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 ATAD5Q96QE3 1844 aa18.24■□□□□ 0.51
LDLRAP1-201ENST00000374338 CCDC166P0CW27 439 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms