RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 DDX23Q9BUQ8 820 aaKnown RBP20.36■□□□□ 0.85
TMEM53-201ENST00000372235 BCO2Q9BYV7 579 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 SEMA4AQ9H3S1 761 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 SLITRK6Q9H5Y7 841 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 TRPV5Q9NQA5 729 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 PVALEFA0A1B0GWK0 134 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 TULP1O00294 542 aaPredicted RBP20.35■□□□□ 0.85
TMEM53-201ENST00000372235 MAN2B1O00754 1011 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 POLR2DO15514 142 aaKnown RBP20.35■□□□□ 0.85
TMEM53-201ENST00000372235 PRPF40AO75400 957 aaKnown RBP20.35■□□□□ 0.85
TMEM53-201ENST00000372235 TNNC2P02585 160 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 SNW1Q13573 536 aaKnown RBP20.35■□□□□ 0.85
TMEM53-201ENST00000372235 TAF12Q16514 161 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 SLC39A12Q504Y0 691 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 FAM78AQ5JUQ0 283 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 FAM26FQ5R3K3 315 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 ZNF852Q6ZMS4 543 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 UNC13DQ70J99 1090 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 HS2ST1Q7LGA3 356 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 CSGALNACT2Q8N6G5 542 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 ZNF507Q8TCN5 953 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 FAM200AQ8TCP9 573 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 GCNAQ96QF7 691 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 CBWD1Q9BRT8 395 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 BRD9Q9H8M2 597 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
TMEM53-201ENST00000372235 NOTCH4Q99466 2003 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 GFRA3O60609 400 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ITGB3P05106 788 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 GLULP15104 373 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 CDC25CP30307 473 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
TMEM53-201ENST00000372235 MYL7Q01449 175 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 DUOXA2Q1HG44 320 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 MGAT5BQ3V5L5 792 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 TANGO2Q6ICL3 276 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ZC3H14Q6PJT7 736 aaKnown RBP20.34■□□□□ 0.85
TMEM53-201ENST00000372235 DPH6Q7L8W6 267 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 DNAJB7Q7Z6W7 309 aaPredicted RBP20.34■□□□□ 0.85
TMEM53-201ENST00000372235 HS6ST3Q8IZP7 471 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ATAD1Q8NBU5 361 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 OR10T2Q8NGX3 314 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ZSCAN18Q8TBC5 510 aaPredicted RBP20.34■□□□□ 0.85
TMEM53-201ENST00000372235 NOC3LQ8WTT2 800 aaKnown RBP20.34■□□□□ 0.85
TMEM53-201ENST00000372235 TCEAL4Q96EI5 215 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 MSANTD3Q96H12 275 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ACBD6Q9BR61 282 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 PCIF1Q9H4Z3 704 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 GDAP2Q9NXN4 497 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 USP25Q9UHP3 1055 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 PCDHA7Q9UN72 937 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 SLC27A5Q9Y2P5 690 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ATP6V1DQ9Y5K8 247 aa20.34■□□□□ 0.85
TMEM53-201ENST00000372235 ANK1P16157 1881 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 DOCK6Q96HP0 2047 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 KRT19P08727 400 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 CCR2P41597 374 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 LHX1P48742 406 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 MLLT6P55198 1093 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-201ENST00000372235 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-201ENST00000372235 RESP18Q5W5W9 173 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 WSCD1Q658N2 575 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 MFSD6LQ8IWD5 586 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 YAF2Q8IY57 180 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 TOP6BLQ8N6T0 577 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 C1orf127Q8N9H9 656 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 LEO1Q8WVC0 666 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-201ENST00000372235 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-201ENST00000372235 NKD2Q969F2 451 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-201ENST00000372235 SEPT5Q99719 369 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-201ENST00000372235 FAM86C1Q9NVL1 165 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 RCOR1Q9UKL0 485 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 PCDHB5Q9Y5E4 795 aa20.33■□□□□ 0.85
TMEM53-201ENST00000372235 GOLGA8IPA6NC78 632 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 GOLGA8JA6NMD2 632 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 SOBPA7XYQ1 873 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 ZNF263O14978 683 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 VNN2O95498 520 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 MYL1P05976 194 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 FCARP24071 287 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 PCSK1P29120 753 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 WEE1P30291 646 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 TEAD2Q15562 447 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 EPM2AIP1Q7L775 607 aaPredicted RBP20.32■□□□□ 0.84
TMEM53-201ENST00000372235 TMC8Q8IU68 726 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 WDR49Q8IV35 697 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 C1orf210Q8IVY1 113 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 TMEM130Q8N3G9 435 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 ST13P5Q8NFI4 369 aaPredicted RBP20.32■□□□□ 0.84
TMEM53-201ENST00000372235 GOLGA5Q8TBA6 731 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 SHKBP1Q8TBC3 707 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 PHOX2BQ99453 314 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 IER2Q9BTL4 223 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 LRRC3Q9BY71 257 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 DNAJC25Q9H1X3 360 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 IKZF4Q9H2S9 585 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 PDE11AQ9HCR9 933 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 ABCB6Q9NP58 842 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 INTS13Q9NVM9 706 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 OBP2AQ9NY56 170 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms