RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CASTOR2A6NHX0 329 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 TMEM189-UBE2V1I3L0A0 370 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 CLDN3O15551 220 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 LILRB3O75022 631 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 CLSTN1O94985 981 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 GNA14O95837 355 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 EFEMP2O95967 443 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 GLUD1P00367 558 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 PDGFBP01127 241 aaPredicted RBP11.17□□□□□ -0.62
COL5A1-202ENST00000371820 WEE2P0C1S8 567 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 MAPTP10636 758 aaKnown RBP11.17□□□□□ -0.62
COL5A1-202ENST00000371820 AVPR2P30518 371 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL5A1-202ENST00000371820 LIG4P49917 911 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 LRRC63Q05C16 580 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 MEA1Q16626 185 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 C15orf39Q6ZRI6 1047 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 UBALD2Q8IYN6 164 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 MYCT1Q8N699 235 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 CSGALNACT2Q8N6G5 542 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
COL5A1-202ENST00000371820 TDRD5Q8NAT2 981 aaKnown RBP11.17□□□□□ -0.62
COL5A1-202ENST00000371820 ZNF507Q8TCN5 953 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
COL5A1-202ENST00000371820 REEP2Q9BRK0 252 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 ZHX3Q9H4I2 956 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 CHST7Q9NS84 486 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 BLOC1S4Q9NUP1 217 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 FNIP2Q9P278 1114 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 USP20Q9Y2K6 914 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
COL5A1-202ENST00000371820 K7ENM7 598 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 IVLP07476 585 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 PROZP22891 400 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 HNRNPH3P31942 346 aaKnown RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 MTIF2P46199 727 aaKnown RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 ZNF131P52739 623 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 KIF5AQ12840 1032 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 MCM6Q14566 821 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 HSP90AA4PQ58FG1 418 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 ARSHQ5FYA8 562 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 XKR4Q5GH76 650 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 GLRA4Q5JXX5 417 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 PAPD7Q5XG87 772 aaKnown RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 DCLRE1AQ6PJP8 1040 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 TAS1R3Q7RTX0 852 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 KIAA1328Q86T90 577 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 ZDHHC14Q8IZN3 488 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 SLC35F6Q8N357 371 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 CMASQ8NFW8 434 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 RIN2Q8WYP3 895 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 SNX27Q96L92 541 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 PPP1R10Q96QC0 940 aaKnown RBP11.16□□□□□ -0.62
COL5A1-202ENST00000371820 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 TTPALQ9BTX7 342 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 FUT8Q9BYC5 575 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 GPR62Q9BZJ7 368 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 PLEKHA4Q9H4M7 779 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 USTQ9Y2C2 406 aa11.16□□□□□ -0.62
COL5A1-202ENST00000371820 NPHP3-ACAD11A0A0J9YXS1 232 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 SMIM28A0A1B0GU29 152 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 HNRNPDLO14979 420 aaKnown RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 TEX28O15482 410 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 TACC1O75410 805 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 B3GAT3O94766 335 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 KIF4AO95239 1232 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 PIGRP01833 764 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 ASGR2P07307 311 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 KCNE1P15382 129 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 TRIM21P19474 475 aaKnown RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 NUBP1P53384 320 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 OSTNP61366 133 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 MCL1Q07820 350 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 NAB2Q15742 525 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 FAM171A1Q5VUB5 890 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CENPPQ6IPU0 288 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CCDC149Q6ZUS6 474 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 UNC13DQ70J99 1090 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 GPR149Q86SP6 731 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 RNF10Q8N5U6 811 aaKnown RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CEP120Q8N960 986 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 TRIM58Q8NG06 486 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 FAM71BQ8TC56 605 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 STAMQ92783 540 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 HVCN1Q96D96 273 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 TSPAN18Q96SJ8 248 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms