RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 INCA1Q0VD86 236 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 SHHQ15465 462 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 RASIP1Q5U651 963 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 LIMS2Q7Z4I7 341 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 SUSD3Q96L08 255 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 RNPC3Q96LT9 517 aaKnown RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 RAD9AQ99638 391 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 COL4A6Q14031 1691 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TNRC18O15417 2968 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 HCRTO43612 131 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TRAPPC3O43617 180 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TLL1O43897 1013 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TACC1O75410 805 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PDGFRBP09619 1106 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 ODC1P11926 461 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PAX3P23760 479 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 EIF4A3P38919 411 aaKnown RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 CDK17Q00537 523 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 MTF1Q14872 753 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 KCNT2Q6UVM3 1135 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 EPS8L1Q8TE68 723 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 CCDC42Q96M95 316 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 SNX25Q9H3E2 840 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 MARCH5Q9NX47 278 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PUF60Q9UHX1 559 aaKnown RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 A8MXQ7 604 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 H0YGN5 161 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 M0QZQ0 153 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 CYP11B1P15538 503 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 LMO2P25791 158 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PDE6CP51160 858 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 ZNF132P52740 706 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 RAD23BP54727 409 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 BPIFB4P59827 614 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TAF3Q5VWG9 929 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 ZNF571Q7Z3V5 609 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 NOP9Q86U38 636 aaKnown RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 FIBCD1Q8N539 461 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM176AQ96HP8 235 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 NT5C1AQ9BXI3 368 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 GPR62Q9BZJ7 368 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 UBE2OQ9C0C9 1292 aaKnown RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 ELOVL4Q9GZR5 314 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 FAM124BQ9H5Z6 455 aaPredicted RBP11.68□□□□□ -0.54
BRCC3-204ENST00000369462 ADAMTS1Q9UHI8 967 aa11.68□□□□□ -0.54
BRCC3-204ENST00000369462 PTPRSQ13332 1948 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 GNA15P30679 374 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM86AQ8N2M4 240 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 SLC4A11Q8NBS3 891 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 SLC20A1Q8WUM9 679 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 BCL7CQ8WUZ0 217 aaPredicted RBP11.67□□□□□ -0.54
BRCC3-204ENST00000369462 ZNF558Q96NG5 402 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRCC3-204ENST00000369462 STXBP5LQ9Y2K9 1186 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 NME7Q9Y5B8 376 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 AKR1B10O60218 316 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 CD19P15391 556 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 RABGGTBP53611 331 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 HS1BP3Q53T59 392 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 FAM171A1Q5VUB5 890 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
BRCC3-204ENST00000369462 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 OSTM1Q86WC4 334 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 IGSF21Q96ID5 467 aa11.67□□□□□ -0.54
BRCC3-204ENST00000369462 HEXIM2Q96MH2 286 aaKnown RBP11.67□□□□□ -0.54
BRCC3-204ENST00000369462 DDX43Q9NXZ2 648 aaKnown RBP11.67□□□□□ -0.54
BRCC3-204ENST00000369462 SF3B1O75533 1304 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRCC3-204ENST00000369462 SSU72P8A0A1W2PR75 194 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 LCHNA4D1U4 455 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 GRXCR1A8MXD5 290 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 GABRDO14764 452 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 LAG3P18627 525 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 WARSP23381 471 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 ACAT1P24752 427 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 TKTP29401 623 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 FUT10Q6P4F1 479 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 UNC93AQ86WB7 457 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 METTL23Q86XA0 190 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 CEP57Q86XR8 500 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 B3GALT6Q96L58 329 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 GDF15Q99988 308 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 DPEP3Q9H4B8 488 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 DSEQ9UL01 958 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms