RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 BAG5Q9UL15 447 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 MYO3BQ8WXR4 1341 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 RIPK2O43353 540 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 WFS1O76024 890 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 OSBPP22059 807 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 SDC4P31431 198 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 KHDC1Q4VXA5 237 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 EXOC3L1Q86VI1 746 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ATL2Q8NHH9 583 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ATP6V1E2Q96A05 226 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 BTBD10Q9BSF8 475 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 HAUS8Q9BT25 410 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.29
NPHP3-201ENST00000337331 CCR3P51677 355 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 ARSEP51690 589 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 BCAR1P56945 870 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 STAT4Q14765 748 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 ANKRD20A4Q4UJ75 823 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 DDHD1Q8NEL9 900 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 CKAP2Q8WWK9 683 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 FAM167AQ96KS9 214 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 GRIP2Q9C0E4 1043 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 ZNF302Q9NR11 478 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 AIPL1Q9NZN9 384 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 MID2Q9UJV3 735 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 NAGPAQ9UK23 515 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.29
NPHP3-201ENST00000337331 ADGRB1O14514 1584 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 TBX3O15119 743 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 HSPA4LO95757 839 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 PAEPP09466 180 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 ALOX15P16050 662 aaPredicted RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 KLRK1P26718 216 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 EEF1DP29692 281 aaKnown RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 BBS5Q8N3I7 341 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 SKA2Q8WVK7 121 aaPredicted RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 PAIP1Q9H074 479 aaKnown RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 VPS11Q9H270 941 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 SLCO1B3Q9NPD5 702 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 KLHL8Q9P2G9 620 aaPredicted RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 PYGMP11217 842 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 KRT3P12035 628 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 ANXA13P27216 316 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 RPA1P27694 616 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 TUBP50607 506 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 MTFR1Q15390 333 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 PARP6Q2NL67 630 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 TRIM72Q6ZMU5 477 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 TSHZ1Q6ZSZ6 1077 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 SCUBE1Q8IWY4 988 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 ATP11CQ8NB49 1132 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 AP5M1Q9H0R1 490 aa16.83■□□□□ 0.28
NPHP3-201ENST00000337331 CHORDC1Q9UHD1 332 aaPredicted RBP16.83■□□□□ 0.28
NPHP3-201ENST00000337331 CCDC195A0A1B0GUA6 201 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 PJA2O43164 708 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 MTA1Q13330 715 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 RBM44Q6ZP01 1051 aaKnown RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 RHPN2Q8IUC4 686 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SDCCAG3Q96C92 435 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 EFHD1Q9BUP0 239 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 RANBP17Q9H2T7 1088 aaKnown RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 NYAP2Q9P242 653 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 ZNF212Q9UDV6 495 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 LRRC42Q9Y546 428 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 ALG6Q9Y672 507 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 MCF2P10911 925 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 RTP1P59025 263 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SH3RF1Q7Z6J0 888 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 IRF2BP1Q8IU81 584 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SLC13A1Q9BZW2 595 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 KLHL11Q9NVR0 708 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 M0QYV0 167 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 P4HA2O15460 535 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SGSM1Q2NKQ1 1148 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 CDC42EP5Q6NZY7 148 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 RAB44Q7Z6P3 723 aaPredicted RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 METTL23Q86XA0 190 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 RYBPQ8N488 228 aaPredicted RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 EIF1ADQ8N9N8 165 aaKnown RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SPATA16Q9BXB7 569 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 APOBEC2Q9Y235 224 aaKnown RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 CASP2P42575 452 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 ACOT2P49753 483 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 MYBPC3Q14896 1274 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SMAD1Q15797 465 aaKnown RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 FAM102AQ5T9C2 384 aaPredicted RBP16.82■□□□□ 0.28
NPHP3-201ENST00000337331 LRRC6Q86X45 466 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 SHCBP1LQ9BZQ2 653 aa16.82■□□□□ 0.28
NPHP3-201ENST00000337331 ESYT2A0FGR8 921 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 ITGA2BP08514 1039 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms