RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 SPATA20Q8TB22 786 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 FGD4Q96M96 766 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 WTIPA6NIX2 430 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 PROSCO94903 275 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 SLITRK3O94933 977 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 PYGBP11216 843 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 MIIPQ5JXC2 388 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 MED15Q96RN5 788 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 DEFB129Q9H1M3 183 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 CACYBPQ9HB71 228 aaKnown RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 L3MBTL1Q9Y468 752 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 PCDHGC5Q9Y5F6 944 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 ATRNO75882 1429 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 PDE2AO00408 941 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 PRAMEP78395 509 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 SV2AQ7L0J3 742 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 RNF168Q8IYW5 571 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-202ENST00000336057 APPL2Q8NEU8 664 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 OR6P1Q8NGX9 317 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 UBA3Q8TBC4 463 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
HDAC5-202ENST00000336057 XPAP23025 273 aaPredicted RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 ERFP50548 548 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 HSD17B4P51659 736 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 PHEXP78562 749 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 TMC3Q7Z5M5 1100 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 NT5DC3Q86UY8 548 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 GIPC2Q8TF65 315 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 PLEKHA5Q9HAU0 1116 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 FAM49BQ9NUQ9 324 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 PIN4Q9Y237 131 aaKnown RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 APOEP02649 317 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 PCNX4Q63HM2 1172 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 MAGEB18Q96M61 343 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 PHTF1Q9UMS5 762 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 MOCS2O96007 188 aaPredicted RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 BOLA3Q53S33 107 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 EFCAB12Q6NXP0 572 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 OTOP1Q7RTM1 612 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 TRIM62Q9BVG3 475 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 B2RBV5 119 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 CDC42EP1Q00587 391 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 TFDP3Q5H9I0 405 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 ANGEL2Q5VTE6 544 aaKnown RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 RNF135Q8IUD6 432 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 NRBF2Q96F24 287 aa16.47■□□□□ 0.23
HDAC5-202ENST00000336057 DDX4Q9NQI0 724 aaKnown RBP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDAC5-202ENST00000336057 AP3B1O00203 1094 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 OGTO15294 1046 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 PDGFRBP09619 1106 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 NAMPTP43490 491 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 ZNF844Q08AG5 666 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 CCNG2Q16589 344 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 RARS2Q5T160 578 aaKnown RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 C4orf22Q6V702 233 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 NDUFAF2Q8N183 169 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 EXD1Q8NHP7 514 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 E2F7Q96AV8 911 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 HPDLQ96IR7 371 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 ZBTB18Q99592 522 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 FRMD8P1Q9BZ68 369 aaPredicted RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 MRPL46Q9H2W6 279 aaKnown RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 HBP1O60381 514 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 SNX2O60749 519 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 SLC30A10Q6XR72 485 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 ZNF662Q6ZS27 426 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 LRRC55Q6ZSA7 311 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 AGO4Q9HCK5 861 aaKnown RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 CD248Q9HCU0 757 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 C3orf70A6NLC5 250 aaPredicted RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 NFIBO00712 420 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 KLC1Q07866 573 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 TSEN2Q8NCE0 465 aaKnown RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 STAMBPL1Q96FJ0 436 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 NSL1Q96IY1 281 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 OLFM3Q96PB7 478 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 LBHD1Q9BQE6 289 aaPredicted RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 KDM4CQ9H3R0 1056 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 GRID1Q9ULK0 1009 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 DFFAO00273 331 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 MCL1Q07820 350 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 NSUN2Q08J23 767 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 MAPRE2Q15555 327 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
HDAC5-202ENST00000336057 PRAMEF18Q5VWM3 479 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 ARHGAP18Q8N392 663 aa16.46■□□□□ 0.23
HDAC5-202ENST00000336057 TRIM49D1C9J1S8 452 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms