RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 KRR1Q13601 381 aaKnown RBP17.08■□□□□ 0.33
PTCH1-201ENST00000331920 POTEGQ6S5H5 508 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.33
PTCH1-201ENST00000331920 FAM160B2Q86V87 743 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 GPD1LQ8N335 351 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 FAM49BQ9NUQ9 324 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 AP3D1O14617 1153 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 CDK8P49336 464 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 RASGRF1Q13972 1273 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 PHACTR4Q8IZ21 702 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 MMGT1Q8N4V1 131 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 MCEEQ96PE7 176 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 RBBP8Q99708 897 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 STN1Q9H668 368 aaKnown RBP17.08■□□□□ 0.33
PTCH1-201ENST00000331920 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 CTSHP09668 335 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 DSG1Q02413 1049 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 PTK7Q13308 1070 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 ARMC4Q5T2S8 1044 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 IARS2Q9NSE4 1012 aaKnown RBP17.08■□□□□ 0.32
PTCH1-201ENST00000331920 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 FANCAO15360 1455 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 CENPXA8MT69 81 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 RHAGQ02094 409 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 TRAF2Q12933 501 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 SMTNL2Q2TAL5 461 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 PPP2R3CQ969Q6 453 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 TINF2Q9BSI4 451 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF185O15231 689 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 ALDH9A1P49189 494 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 ATP1A4Q13733 1029 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 KAT2BQ92831 832 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 PIGUQ9H490 435 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 FAM153AQ9UHL3 310 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 EEF2KO00418 725 aaKnown RBP17.08■□□□□ 0.32
PTCH1-201ENST00000331920 HLA-DQA2P01906 255 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 IL12RB1P42701 662 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 PRCPP42785 496 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 CAMK2GQ13555 558 aaPredicted RBP17.08■□□□□ 0.32
PTCH1-201ENST00000331920 CHI3L2Q15782 390 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 DALRD3Q5D0E6 543 aaKnown RBP17.08■□□□□ 0.32
PTCH1-201ENST00000331920 TTC39BQ5VTQ0 682 aaPredicted RBP17.08■□□□□ 0.32
PTCH1-201ENST00000331920 TIGD7Q6NT04 549 aaPredicted RBP17.08■□□□□ 0.32
PTCH1-201ENST00000331920 FAM167AQ96KS9 214 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 SPACA7Q96KW9 195 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 TRPC4Q9UBN4 977 aa17.08■□□□□ 0.32
PTCH1-201ENST00000331920 LBPP18428 481 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 HOXD10P28358 340 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 COASYQ13057 564 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 CLYBLQ8N0X4 340 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 LIMA1Q9UHB6 759 aaKnown RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 DUOXA2Q1HG44 320 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 KRT74Q7RTS7 529 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 TMC4Q7Z404 712 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 SLC7A14Q8TBB6 771 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 DNAJC9Q8WXX5 260 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 RGS12O14924 1447 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 IRX1P78414 480 aaPredicted RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 C3orf62Q6ZUJ4 267 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 KCTD10Q9H3F6 313 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 CRLS1Q9UJA2 301 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 EMSYQ7Z589 1322 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 POTECB2RU33 542 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 TERF2Q15554 542 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 NDUFAF6Q330K2 333 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 PGBD2Q6P3X8 592 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 B2RBV5 119 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 TSPAN9O75954 239 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 PDE8BO95263 885 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 NRG3P56975 720 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 C1DQ13901 141 aaKnown RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 DGKDQ16760 1214 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 ARMC3Q5W041 872 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 ERLEC1Q96DZ1 483 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 CCDC3Q9BQI4 270 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 PHF20L1A8MW92 1017 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 MTFR1Q15390 333 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 ESRP1Q6NXG1 681 aaKnown RBP17.07■□□□□ 0.32
PTCH1-201ENST00000331920 MED8Q96G25 268 aa17.07■□□□□ 0.32
PTCH1-201ENST00000331920 GNG14A0A1W2PPG7 69 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 MAP3K13O43283 966 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 CYP4Z1Q86W10 505 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 SLC13A5Q86YT5 568 aaPredicted RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 UTP15Q8TED0 518 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 ZCCHC17Q9NP64 241 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 SEC31BQ9NQW1 1179 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 LRRC14BA6NHZ5 514 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 CLTBP09497 229 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms