RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 FARP1Q9Y4F1 1045 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 PDE5AO76074 875 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 GSNP06396 782 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 CCND1P24385 295 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 GTF2H1P32780 548 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 RUNX1T1Q06455 604 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 PTGISQ16647 500 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 GCC2Q8IWJ2 1684 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 CST8O60676 142 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 RAB14P61106 215 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 LAMC2Q13753 1193 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 DAB2IPQ5VWQ8 1189 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 E2F7Q96AV8 911 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 HEY2Q9UBP5 337 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 A0A1B0GTH6 734 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 HSMCR30P0CW71 290 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 HSD17B3P37058 310 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 CAPZA2P47755 286 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 MTMR2Q13614 643 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 LUZP2Q86TE4 346 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 ROGDIQ9GZN7 287 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 HOXC10Q9NYD6 342 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 HMGCS2P54868 508 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 PTRHD1Q6GMV3 140 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 RASGRP2Q7LDG7 609 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 ASAP3Q8TDY4 903 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 THUMPD3Q9BV44 507 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 TRIM9Q9C026 710 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 GID8Q9NWU2 228 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 SMG5Q9UPR3 1016 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 KRT87PA6NCN2 255 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 GYPCP04921 128 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 NR1I3Q14994 352 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 MTHFD1LQ6UB35 978 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 LDHDQ86WU2 507 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 UXS1Q8NBZ7 420 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 USP13Q92995 863 aaPredicted RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 SPASTQ9UBP0 616 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 SRGNP10124 158 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 GNAT1P11488 350 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 POU1F1P28069 291 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 ABCE1P61221 599 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 DSG1Q02413 1049 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 SNRNP35Q16560 246 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 KCNT1Q5JUK3 1230 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 APPL2Q8NEU8 664 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 USP1O94782 785 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 KLRC1P26715 233 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 TMC5Q6UXY8 1006 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 FAM167AQ96KS9 214 aa17.53■□□□□ 0.4
TSPAN3-201ENST00000267970 FOSL2P15408 326 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 KCNK10P57789 538 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 GOLGA7BQ2TAP0 167 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 NAIF1Q69YI7 327 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 P3H2Q8IVL5 708 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 VMP1Q96GC9 406 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 A0A1W2PQC6 194 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 C16orf96A6NNT2 1141 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 MEI4A8MW99 385 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 KCTD19Q17RG1 926 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 C10orf53Q8N6V4 93 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 ZFP42Q96MM3 310 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 PHTF1Q9UMS5 762 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 RSPH10B2B2RC85 870 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 RSPH10BP0C881 870 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 TRIP4Q15650 581 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 REXO1L1PQ8IX06 675 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 OR8H2Q8N162 312 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 ZNF669Q96BR6 464 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 DTNBP1Q96EV8 351 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 GPBP1L1Q9HC44 474 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.52■□□□□ 0.41e-9■□□□□ 11
TSPAN3-201ENST00000267970 SNX13Q9Y5W8 968 aa17.52■□□□□ 0.4
TSPAN3-201ENST00000267970 C2CD2LO14523 706 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 PMPCBO75439 489 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 ZNF23P17027 643 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 ITIH2P19823 946 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 PBLDP30039 288 aaPredicted RBP17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 CDC16Q13042 620 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 PGBD3Q8N328 593 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 SCFD1Q8WVM8 642 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 SEMA4DQ92854 862 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 KCNK16Q96T55 309 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 STK33Q9BYT3 514 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 PGK2P07205 417 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 PGS1Q32NB8 556 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 CYB5D1Q6P9G0 228 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 PDLIM2Q96JY6 352 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 OSBPL8Q9BZF1 889 aa17.52■□□□□ 0.39
TSPAN3-201ENST00000267970 CDH16O75309 829 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 GPAT2Q6NUI2 795 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 THAP2Q9H0W7 228 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 TRIM49D1C9J1S8 452 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 ALBP02768 609 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 MAGED4Q96JG8 741 aa17.51■□□□□ 0.39
TSPAN3-201ENST00000267970 ECSITQ9BQ95 431 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms