RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W YER134CP40081 178 aa2.62□□□□□ -1.99
USV1YPL230W GPI14P47088 403 aaKnown RBP2.62□□□□□ -1.99
USV1YPL230W TTI2P47168 421 aa2.62□□□□□ -1.99
USV1YPL230W AIF1P52923 378 aa2.62□□□□□ -1.99
USV1YPL230W RPL26BP53221 127 aaKnown RBP2.62□□□□□ -1.99
USV1YPL230W PKR1Q03880 122 aaKnown RBP2.62□□□□□ -1.99
USV1YPL230W NEJ1Q06148 342 aa2.62□□□□□ -1.99
USV1YPL230W YOR342CQ12182 319 aa2.62□□□□□ -1.99
USV1YPL230W PRM7Q12459 698 aa2.62□□□□□ -1.99
USV1YPL230W SNC2P33328 115 aa2.61□□□□□ -1.99
USV1YPL230W NUF2P33895 451 aa2.61□□□□□ -1.99
USV1YPL230W AVT2P39981 480 aa2.61□□□□□ -1.99
USV1YPL230W MNN5P46982 586 aa2.61□□□□□ -1.99
USV1YPL230W NAT3Q06504 195 aa2.61□□□□□ -1.99
USV1YPL230W DGK1Q12382 290 aa2.61□□□□□ -1.99
USV1YPL230W YIL177CP40434 1758 aa2.61□□□□□ -1.99
USV1YPL230W YJL225CP40889 1758 aa2.61□□□□□ -1.99
USV1YPL230W CPA1P07258 411 aaKnown RBP2.6□□□□□ -1.99
USV1YPL230W UBI4P0CG63 381 aaKnown RBP2.6□□□□□ -1.99
USV1YPL230W MIG1P27705 504 aa2.6□□□□□ -1.99
USV1YPL230W UPS2P35200 230 aa2.6□□□□□ -1.99
USV1YPL230W KDX1P36005 433 aa2.6□□□□□ -1.99
USV1YPL230W SHE2P36068 246 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
USV1YPL230W OPY1P38271 328 aa2.6□□□□□ -1.99
USV1YPL230W PGD1P40356 397 aa2.6□□□□□ -1.99
USV1YPL230W FSF1Q12029 327 aaKnown RBP2.6□□□□□ -1.99
USV1YPL230W DAS2Q12084 232 aa2.6□□□□□ -1.99
USV1YPL230W YML100W-AQ8TGT0 57 aa2.6□□□□□ -1.99
USV1YPL230W YAR023CD6VPM8 179 aa2.59□□□□□ -1.99
USV1YPL230W IDP1P21954 428 aaKnown RBP2.59□□□□□ -1.99
USV1YPL230W PAN3P36102 679 aaPredicted RBP2.59□□□□□ -1.99
USV1YPL230W YBR285WP38354 144 aa2.59□□□□□ -1.99
USV1YPL230W YAP3P38749 330 aa2.59□□□□□ -1.99
USV1YPL230W YHR180WP38868 163 aa2.59□□□□□ -1.99
USV1YPL230W YNL200CP40165 246 aaKnown RBP2.59□□□□□ -1.99
USV1YPL230W DOC1P53068 250 aa2.59□□□□□ -1.99
USV1YPL230W YGR219WP53307 113 aa2.59□□□□□ -1.99
USV1YPL230W YDR274CP87283 123 aa2.59□□□□□ -1.99
USV1YPL230W VPS71Q03433 280 aa2.59□□□□□ -1.99
USV1YPL230W THI74Q04083 370 aa2.59□□□□□ -1.99
USV1YPL230W SPG3Q04398 127 aaPredicted RBP2.59□□□□□ -1.99
USV1YPL230W YOL014WQ08110 124 aa2.59□□□□□ -1.99
USV1YPL230W SDH4P37298 181 aa2.58□□□□□ -2
USV1YPL230W SLM6P38343 150 aa2.58□□□□□ -2
USV1YPL230W SPO73P40031 143 aa2.58□□□□□ -2
USV1YPL230W VTC1P40046 129 aaRIP-Chip data2.58□□□□□ -2not detected
USV1YPL230W DLS1P40366 167 aa2.58□□□□□ -2
USV1YPL230W APQ12P40532 138 aa2.58□□□□□ -2
USV1YPL230W YFL019CP43576 117 aa2.58□□□□□ -2
USV1YPL230W SOL1P50278 321 aa2.58□□□□□ -2
USV1YPL230W YNR062CP53748 327 aa2.58□□□□□ -2
USV1YPL230W PDR18P53756 1333 aa2.58□□□□□ -2
USV1YPL230W LSM3P57743 89 aaKnown RBP2.57□□□□□ -2
USV1YPL230W RAV2Q03956 351 aa2.57□□□□□ -2
USV1YPL230W YPR202WQ08993 238 aa2.57□□□□□ -2
USV1YPL230W POR1P04840 283 aaKnown RBP2.56□□□□□ -2
USV1YPL230W CLB6P32943 380 aa2.56□□□□□ -2
USV1YPL230W YET1P35723 206 aa2.56□□□□□ -2
USV1YPL230W CSH1P38287 376 aa2.56□□□□□ -2
USV1YPL230W IPI1P38803 334 aaPredicted RBP2.56□□□□□ -2
USV1YPL230W GIM4P40005 111 aaKnown RBP2.56□□□□□ -2
USV1YPL230W FCY21P40039 528 aa2.56□□□□□ -2
USV1YPL230W YJL144WP47009 104 aa2.56□□□□□ -2
USV1YPL230W RBL2P48606 106 aaKnown RBP2.56□□□□□ -2
USV1YPL230W YGR042WP53227 271 aa2.56□□□□□ -2
USV1YPL230W TIM13P53299 105 aa2.56□□□□□ -2
USV1YPL230W RDS3Q06835 107 aaPredicted RBP2.56□□□□□ -2
USV1YPL230W PEX34P25584 144 aa2.55□□□□□ -2
USV1YPL230W STP22P25604 385 aa2.55□□□□□ -2
USV1YPL230W NSA2P40078 261 aaKnown RBP2.55□□□□□ -2
USV1YPL230W YJR146WP47174 117 aa2.55□□□□□ -2
USV1YPL230W ORM1P53224 222 aa2.55□□□□□ -2
USV1YPL230W HHT1P61830 136 aa2.55□□□□□ -2
USV1YPL230W YMR099CQ03161 297 aaKnown RBP2.55□□□□□ -2
USV1YPL230W MRPS8Q03799 155 aa2.55□□□□□ -2
USV1YPL230W SHH3Q04487 196 aa2.55□□□□□ -2
USV1YPL230W YOR214CQ12282 236 aa2.55□□□□□ -2
USV1YPL230W ATO3Q12359 275 aa2.55□□□□□ -2
USV1YPL230W RPL2AP0CX45 254 aaKnown RBP2.54□□□□□ -2
USV1YPL230W RPL2BP0CX46 254 aaKnown RBP2.54□□□□□ -2
USV1YPL230W TIR1P10863 254 aa2.54□□□□□ -2
USV1YPL230W CYC2P38909 366 aa2.54□□□□□ -2
USV1YPL230W TIR3P40552 269 aa2.54□□□□□ -2
USV1YPL230W RPL33BP41056 107 aaKnown RBP2.54□□□□□ -2
USV1YPL230W GLR1P41921 483 aaKnown RBP2.54□□□□□ -2
USV1YPL230W VPS68Q12016 184 aa2.54□□□□□ -2
USV1YPL230W RAS2P01120 322 aaKnown RBP2.53□□□□□ -2
USV1YPL230W ERV15P38312 142 aa2.53□□□□□ -2
USV1YPL230W SVP26P38869 228 aa2.53□□□□□ -2
USV1YPL230W SPC25P40014 221 aa2.53□□□□□ -2
USV1YPL230W CCC1P47818 322 aa2.53□□□□□ -2
USV1YPL230W YGL204CP53089 101 aa2.53□□□□□ -2
USV1YPL230W MPC3P53311 146 aa2.53□□□□□ -2
USV1YPL230W SLM2P53955 656 aa2.53□□□□□ -2
USV1YPL230W DAD3P69850 94 aa2.53□□□□□ -2
USV1YPL230W YMR295CQ03559 197 aa2.53□□□□□ -2
USV1YPL230W CSN9Q03981 162 aa2.53□□□□□ -2
USV1YPL230W YMR320WQ04897 101 aa2.53□□□□□ -2
USV1YPL230W ATG40Q99325 256 aa2.53□□□□□ -2
USV1YPL230W YPR096CO13587 100 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms