RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W PAN3P36102 679 aaPredicted RBP3.78□□□□□ -1.8
ROT1YMR200W YAR068WP39564 161 aa3.78□□□□□ -1.8
ROT1YMR200W PGD1P40356 397 aa3.78□□□□□ -1.8
ROT1YMR200W MIC19P43594 170 aa3.78□□□□□ -1.8
ROT1YMR200W IGD1P43598 195 aa3.78□□□□□ -1.8
ROT1YMR200W SKI6P46948 246 aaPredicted RBP3.78□□□□□ -1.8
ROT1YMR200W XPT1P47165 209 aa3.78□□□□□ -1.8
ROT1YMR200W TTI2P47168 421 aa3.78□□□□□ -1.8
ROT1YMR200W YGR219WP53307 113 aa3.78□□□□□ -1.8
ROT1YMR200W ACT1P60010 375 aaKnown RBP3.78□□□□□ -1.8
ROT1YMR200W YDR366CP87287 132 aa3.78□□□□□ -1.8
ROT1YMR200W YPL225WQ08971 146 aaKnown RBP3.78□□□□□ -1.8
ROT1YMR200W DGK1Q12382 290 aa3.78□□□□□ -1.8
ROT1YMR200W YIL177CP40434 1758 aa3.78□□□□□ -1.8
ROT1YMR200W YJL225CP40889 1758 aa3.78□□□□□ -1.8
ROT1YMR200W SIN3P22579 1536 aa3.77□□□□□ -1.81
ROT1YMR200W ADH1P00330 348 aaKnown RBP3.77□□□□□ -1.81
ROT1YMR200W RPB3P16370 318 aaKnown RBP3.77□□□□□ -1.81
ROT1YMR200W BET1P22804 142 aa3.77□□□□□ -1.81
ROT1YMR200W ASP1P38986 381 aaPredicted RBP3.77□□□□□ -1.81
ROT1YMR200W MIG3P39943 394 aa3.77□□□□□ -1.81
ROT1YMR200W AYR1P40471 297 aa3.77□□□□□ -1.81
ROT1YMR200W YIL054WP40524 105 aa3.77□□□□□ -1.81
ROT1YMR200W YGR039WP53225 103 aa3.77□□□□□ -1.81
ROT1YMR200W FCY1Q12178 158 aa3.77□□□□□ -1.81
ROT1YMR200W DFM1Q12743 341 aaKnown RBP3.77□□□□□ -1.81
ROT1YMR200W PAN1P32521 1480 aa3.76□□□□□ -1.81
ROT1YMR200W YEL009C-AA0A023PZF2 135 aa3.76□□□□□ -1.81
ROT1YMR200W TKL2P33315 681 aa3.76□□□□□ -1.81
ROT1YMR200W YBL059WP34224 193 aa3.76□□□□□ -1.81
ROT1YMR200W GLR1P41921 483 aaKnown RBP3.76□□□□□ -1.81
ROT1YMR200W PFS2P42841 465 aaKnown RBP3.76□□□□□ -1.81
ROT1YMR200W TDA4P47153 279 aa3.76□□□□□ -1.81
ROT1YMR200W SLM2P53955 656 aa3.76□□□□□ -1.81
ROT1YMR200W APS2Q00381 147 aa3.76□□□□□ -1.81
ROT1YMR200W DIG2Q03373 323 aaKnown RBP3.76□□□□□ -1.81
ROT1YMR200W FYV7Q12247 151 aa3.76□□□□□ -1.81
ROT1YMR200W ADH3P07246 375 aaKnown RBP3.75□□□□□ -1.81
ROT1YMR200W YLR156WP0CE96 114 aa3.75□□□□□ -1.81
ROT1YMR200W YLR159WP0CE97 114 aa3.75□□□□□ -1.81
ROT1YMR200W YLR161WP0CE98 114 aa3.75□□□□□ -1.81
ROT1YMR200W TIR1P10863 254 aa3.75□□□□□ -1.81
ROT1YMR200W CCA1P21269 546 aa3.75□□□□□ -1.81
ROT1YMR200W RNP1P32385 249 aa3.75□□□□□ -1.81
ROT1YMR200W NSG1P38837 291 aa3.75□□□□□ -1.81
ROT1YMR200W FIS1P40515 155 aa3.75□□□□□ -1.81
ROT1YMR200W FIP1P45976 327 aa3.75□□□□□ -1.81
ROT1YMR200W VPS71Q03433 280 aa3.75□□□□□ -1.81
ROT1YMR200W CGI121Q03705 181 aaKnown RBP3.75□□□□□ -1.81
ROT1YMR200W TVP15Q03860 143 aa3.75□□□□□ -1.81
ROT1YMR200W YOL014WQ08110 124 aa3.75□□□□□ -1.81
ROT1YMR200W SMT3Q12306 101 aaKnown RBP3.75□□□□□ -1.81
ROT1YMR200W YPL247CQ12523 523 aa3.75□□□□□ -1.81
ROT1YMR200W YML100W-AQ8TGT0 57 aa3.75□□□□□ -1.81
ROT1YMR200W URA5P13298 226 aaKnown RBP3.74□□□□□ -1.81
ROT1YMR200W FCY21P40039 528 aa3.74□□□□□ -1.81
ROT1YMR200W PRE5P40302 234 aaKnown RBP3.74□□□□□ -1.81
ROT1YMR200W REE1P40893 198 aa3.74□□□□□ -1.81
ROT1YMR200W SER2P42941 309 aa3.74□□□□□ -1.81
ROT1YMR200W CAX4P53223 239 aa3.74□□□□□ -1.81
ROT1YMR200W OSH6Q02201 448 aa3.74□□□□□ -1.81
ROT1YMR200W ECM19Q06011 112 aa3.74□□□□□ -1.81
ROT1YMR200W MCP1Q12106 302 aa3.74□□□□□ -1.81
ROT1YMR200W YDL211CQ12121 372 aa3.74□□□□□ -1.81
ROT1YMR200W ATP5P09457 212 aa3.73□□□□□ -1.81
ROT1YMR200W PHO85P17157 305 aa3.73□□□□□ -1.81
ROT1YMR200W BUD23P25627 275 aaPredicted RBP3.73□□□□□ -1.81
ROT1YMR200W RCN1P36054 211 aa3.73□□□□□ -1.81
ROT1YMR200W KRE9P39005 276 aa3.73□□□□□ -1.81
ROT1YMR200W RRT13P40042 185 aa3.73□□□□□ -1.81
ROT1YMR200W YMR253CQ04835 414 aa3.73□□□□□ -1.81
ROT1YMR200W ATG39Q06159 398 aa3.73□□□□□ -1.81
ROT1YMR200W SPC3Q12133 184 aa3.73□□□□□ -1.81
ROT1YMR200W YLR099W-AQ3E798 87 aa3.73□□□□□ -1.81
ROT1YMR200W ISD11Q6Q560 94 aa3.73□□□□□ -1.81
ROT1YMR200W BPT1P14772 1559 aa3.72□□□□□ -1.81
ROT1YMR200W SSK2P53599 1579 aa3.72□□□□□ -1.81
ROT1YMR200W FMP49A0A023PZB3 126 aa3.72□□□□□ -1.81
ROT1YMR200W NMT1P14743 455 aa3.72□□□□□ -1.81
ROT1YMR200W ARO2P28777 376 aaKnown RBP3.72□□□□□ -1.81
ROT1YMR200W SRP21P32342 167 aa3.72□□□□□ -1.81
ROT1YMR200W GPI2P46961 280 aa3.72□□□□□ -1.81
ROT1YMR200W YGL193CP53097 103 aa3.72□□□□□ -1.81
ROT1YMR200W PPT2Q12036 173 aa3.72□□□□□ -1.81
ROT1YMR200W BOL1Q3E793 110 aa3.72□□□□□ -1.81
ROT1YMR200W YNL277W-AQ3E7Z0 62 aa3.72□□□□□ -1.81
ROT1YMR200W YAL067W-AQ8TGK6 75 aa3.72□□□□□ -1.81
ROT1YMR200W DDI2P0CH63 225 aa3.71□□□□□ -1.82
ROT1YMR200W DDI3P0CH64 225 aa3.71□□□□□ -1.82
ROT1YMR200W SPT15P13393 240 aaKnown RBP3.71□□□□□ -1.82
ROT1YMR200W PRE7P23724 241 aaKnown RBP3.71□□□□□ -1.82
ROT1YMR200W RPB9P27999 122 aa3.71□□□□□ -1.82
ROT1YMR200W SPT14P32363 452 aa3.71□□□□□ -1.82
ROT1YMR200W VMA11P32842 164 aa3.71□□□□□ -1.82
ROT1YMR200W SNC2P33328 115 aa3.71□□□□□ -1.82
ROT1YMR200W COS8P38723 381 aa3.71□□□□□ -1.82
ROT1YMR200W YER181CP40097 107 aa3.71□□□□□ -1.82
ROT1YMR200W YFL019CP43576 117 aa3.71□□□□□ -1.82
ROT1YMR200W CWC27Q02770 301 aa3.71□□□□□ -1.82
ROT1YMR200W AIM36Q03798 255 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 111.3 ms