RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W PHO88P38264 188 aaPredicted RBP2.56□□□□□ -2
CTK1YKL139W TMA22P47089 198 aaPredicted RBP2.56□□□□□ -2
CTK1YKL139W ODC2Q99297 307 aa2.56□□□□□ -2
CTK1YKL139W CMD1P06787 147 aaKnown RBP2.55□□□□□ -2
CTK1YKL139W CPA1P07258 411 aaKnown RBP2.55□□□□□ -2
CTK1YKL139W KDX1P36005 433 aa2.55□□□□□ -2
CTK1YKL139W TVP38P36164 337 aa2.55□□□□□ -2
CTK1YKL139W YER134CP40081 178 aa2.55□□□□□ -2
CTK1YKL139W TIR3P40552 269 aa2.55□□□□□ -2
CTK1YKL139W GPI14P47088 403 aaKnown RBP2.55□□□□□ -2
CTK1YKL139W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
CTK1YKL139W FSF1Q12029 327 aaKnown RBP2.55□□□□□ -2
CTK1YKL139W YOR342CQ12182 319 aa2.55□□□□□ -2
CTK1YKL139W SCL1P21243 252 aaKnown RBP2.54□□□□□ -2
CTK1YKL139W FIG1P38224 298 aa2.54□□□□□ -2
CTK1YKL139W YFH7P43591 353 aa2.54□□□□□ -2
CTK1YKL139W BOL2P53082 120 aa2.54□□□□□ -2
CTK1YKL139W HSK3P69852 69 aa2.54□□□□□ -2
CTK1YKL139W YMR099CQ03161 297 aaKnown RBP2.54□□□□□ -2
CTK1YKL139W PLP1Q04004 230 aa2.54□□□□□ -2
CTK1YKL139W DYN3Q04949 312 aa2.54□□□□□ -2
CTK1YKL139W NAT3Q06504 195 aa2.54□□□□□ -2
CTK1YKL139W YLR053CQ12026 108 aa2.54□□□□□ -2
CTK1YKL139W YAR023CD6VPM8 179 aa2.53□□□□□ -2
CTK1YKL139W POR1P04840 283 aaKnown RBP2.53□□□□□ -2
CTK1YKL139W DER1P38307 211 aa2.53□□□□□ -2
CTK1YKL139W FCY21P40039 528 aa2.53□□□□□ -2
CTK1YKL139W VTC1P40046 129 aaRIP-Chip data2.53□□□□□ -2not detected
CTK1YKL139W YFL019CP43576 117 aa2.53□□□□□ -2
CTK1YKL139W SOL1P50278 321 aa2.53□□□□□ -2
CTK1YKL139W RDI1Q12434 202 aa2.53□□□□□ -2
CTK1YKL139W RAS2P01120 322 aaKnown RBP2.53□□□□□ -2.01
CTK1YKL139W RPS28BP0C0X0 67 aaKnown RBP2.53□□□□□ -2.01
CTK1YKL139W NSG1P38837 291 aa2.53□□□□□ -2.01
CTK1YKL139W MTW1P39731 289 aa2.53□□□□□ -2.01
CTK1YKL139W EDC3P39998 551 aaKnown RBP2.53□□□□□ -2.01
CTK1YKL139W RFC2P40348 353 aa2.53□□□□□ -2.01
CTK1YKL139W MPC3P53311 146 aa2.53□□□□□ -2.01
CTK1YKL139W DAD3P69850 94 aa2.53□□□□□ -2.01
CTK1YKL139W RGM1Q00453 211 aa2.53□□□□□ -2.01
CTK1YKL139W RPS28AQ3E7X9 67 aaPredicted RBP2.53□□□□□ -2.01
CTK1YKL139W PDR18P53756 1333 aa2.52□□□□□ -2.01
CTK1YKL139W YNL217WP40152 326 aa2.52□□□□□ -2.01
CTK1YKL139W CGI121Q03705 181 aaKnown RBP2.52□□□□□ -2.01
CTK1YKL139W NSL1Q12143 216 aa2.52□□□□□ -2.01
CTK1YKL139W DGK1Q12382 290 aa2.52□□□□□ -2.01
CTK1YKL139W YHR022CP38763 256 aa2.51□□□□□ -2.01
CTK1YKL139W DAN1P47178 298 aa2.51□□□□□ -2.01
CTK1YKL139W CYT2Q00873 224 aa2.51□□□□□ -2.01
CTK1YKL139W DNA2P38859 1522 aa2.5□□□□□ -2.01
CTK1YKL139W SPO13P23624 291 aa2.5□□□□□ -2.01
CTK1YKL139W YCR023CP25351 611 aa2.5□□□□□ -2.01
CTK1YKL139W YLR412C-AQ3E742 68 aa2.5□□□□□ -2.01
CTK1YKL139W SHE2P36068 246 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CTK1YKL139W AGE2P40529 298 aa2.49□□□□□ -2.01
CTK1YKL139W ERJ5P43613 295 aaPredicted RBP2.49□□□□□ -2.01
CTK1YKL139W SBH2P52871 88 aa2.49□□□□□ -2.01
CTK1YKL139W ERG25P53045 309 aa2.49□□□□□ -2.01
CTK1YKL139W VPS71Q03433 280 aa2.49□□□□□ -2.01
CTK1YKL139W MAK3Q03503 176 aa2.49□□□□□ -2.01
CTK1YKL139W ATG40Q99325 256 aa2.49□□□□□ -2.01
CTK1YKL139W PET20Q99373 253 aa2.49□□□□□ -2.01
CTK1YKL139W NSP1P14907 823 aaKnown RBP2.49□□□□□ -2.01
CTK1YKL139W SVP26P38869 228 aa2.49□□□□□ -2.01
CTK1YKL139W NUM1Q00402 2748 aa2.48□□□□□ -2.01
CTK1YKL139W DDI2P0CH63 225 aa2.48□□□□□ -2.01
CTK1YKL139W DDI3P0CH64 225 aa2.48□□□□□ -2.01
CTK1YKL139W CSH1P38287 376 aa2.48□□□□□ -2.01
CTK1YKL139W TTI2P47168 421 aa2.48□□□□□ -2.01
CTK1YKL139W TMA20P89886 181 aaPredicted RBP2.48□□□□□ -2.01
CTK1YKL139W YMR295CQ03559 197 aa2.48□□□□□ -2.01
CTK1YKL139W YPR127WQ06494 345 aa2.48□□□□□ -2.01
CTK1YKL139W DAS2Q12084 232 aa2.48□□□□□ -2.01
CTK1YKL139W YDL180WQ12301 547 aa2.48□□□□□ -2.01
CTK1YKL139W YLR236CA0A023PZG4 107 aa2.47□□□□□ -2.01
CTK1YKL139W TIR1P10863 254 aa2.47□□□□□ -2.01
CTK1YKL139W FZF1P32805 299 aa2.47□□□□□ -2.01
CTK1YKL139W TVP23P38962 199 aa2.47□□□□□ -2.01
CTK1YKL139W MPA43P53583 542 aaPredicted RBP2.47□□□□□ -2.01
CTK1YKL139W FYV12Q08559 129 aa2.47□□□□□ -2.01
CTK1YKL139W CPR5P35176 225 aa2.46□□□□□ -2.02
CTK1YKL139W SLM6P38343 150 aa2.46□□□□□ -2.02
CTK1YKL139W GAA1P39012 614 aa2.46□□□□□ -2.02
CTK1YKL139W CUP9P41817 306 aa2.46□□□□□ -2.02
CTK1YKL139W YGL101WP53144 215 aa2.46□□□□□ -2.02
CTK1YKL139W DIG2Q03373 323 aaKnown RBP2.46□□□□□ -2.02
CTK1YKL139W THI74Q04083 370 aa2.46□□□□□ -2.02
CTK1YKL139W YBR209WP38311 105 aa2.45□□□□□ -2.02
CTK1YKL139W YFR054CP43622 192 aa2.45□□□□□ -2.02
CTK1YKL139W SBH1P52870 82 aa2.45□□□□□ -2.02
CTK1YKL139W YDR476CQ03362 224 aa2.45□□□□□ -2.02
CTK1YKL139W SHH3Q04487 196 aa2.45□□□□□ -2.02
CTK1YKL139W MET5P47169 1442 aa2.45□□□□□ -2.02
CTK1YKL139W BUB2P26448 306 aaPredicted RBP2.44□□□□□ -2.02
CTK1YKL139W PAM17P36147 197 aa2.44□□□□□ -2.02
CTK1YKL139W SPC25P40014 221 aa2.44□□□□□ -2.02
CTK1YKL139W XPT1P47165 209 aa2.44□□□□□ -2.02
CTK1YKL139W YMR253CQ04835 414 aa2.44□□□□□ -2.02
CTK1YKL139W IRC23Q08416 157 aa2.44□□□□□ -2.02
CTK1YKL139W YPR202WQ08993 238 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms