RNA–Protein interactions for RNA: YJR099W

YUH1, Transcript of Ubiquitin C-terminal hydrolase, yeast

Gene YUH1, Length 711 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YUH1	YJR099W	YMR099C	Q03161	297 aa	Known RBP	2.64	□□□□□ -1.99
YUH1	YJR099W	VPS68	Q12016	184 aa		2.64	□□□□□ -1.99
YUH1	YJR099W	PET20	Q99373	253 aa		2.64	□□□□□ -1.99
YUH1	YJR099W	CPA1	P07258	411 aa	Known RBP	2.63	□□□□□ -1.99
YUH1	YJR099W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
YUH1	YJR099W	CLB6	P32943	380 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	YET1	P35723	206 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	PAN3	P36102	679 aa	Predicted RBP	2.63	□□□□□ -1.99
YUH1	YJR099W	FCY21	P40039	528 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	RFC2	P40348	353 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	RPL33B	P41056	107 aa	Known RBP	2.63	□□□□□ -1.99
YUH1	YJR099W	DOC1	P53068	250 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	YNR062C	P53748	327 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	YDR476C	Q03362	224 aa		2.63	□□□□□ -1.99
YUH1	YJR099W	ERV15	P38312	142 aa		2.62	□□□□□ -1.99
YUH1	YJR099W	YBR285W	P38354	144 aa		2.62	□□□□□ -1.99
YUH1	YJR099W	YER134C	P40081	178 aa		2.62	□□□□□ -1.99
YUH1	YJR099W	TMA20	P89886	181 aa	Predicted RBP	2.62	□□□□□ -1.99
YUH1	YJR099W	MIX17	Q03667	156 aa		2.62	□□□□□ -1.99
YUH1	YJR099W	MRPS8	Q03799	155 aa		2.62	□□□□□ -1.99
YUH1	YJR099W	ODC2	Q99297	307 aa		2.62	□□□□□ -1.99
YUH1	YJR099W	POR1	P04840	283 aa	Known RBP	2.61	□□□□□ -1.99
YUH1	YJR099W	SPO13	P23624	291 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	YCR023C	P25351	611 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	KDX1	P36005	433 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	SRP102	P36057	244 aa	Predicted RBP	2.61	□□□□□ -1.99
YUH1	YJR099W	NSG1	P38837	291 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	SOL1	P50278	321 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	MPA43	P53583	542 aa	Predicted RBP	2.61	□□□□□ -1.99
YUH1	YJR099W	NAT3	Q06504	195 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	HRT1	Q08273	121 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	DGK1	Q12382	290 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	EMC6	Q12431	108 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	PDR18	P53756	1333 aa		2.61	□□□□□ -1.99
YUH1	YJR099W	YAR023C	D6VPM8	179 aa		2.6	□□□□□ -1.99
YUH1	YJR099W	BUB2	P26448	306 aa	Predicted RBP	2.6	□□□□□ -1.99
YUH1	YJR099W	VTC1	P40046	129 aa	RIP-Chip data	2.6	□□□□□ -1.99	not detected
YUH1	YJR099W	TIR3	P40552	269 aa		2.6	□□□□□ -1.99
YUH1	YJR099W	YFL019C	P43576	117 aa		2.6	□□□□□ -1.99
YUH1	YJR099W	YGL101W	P53144	215 aa		2.6	□□□□□ -1.99
YUH1	YJR099W	NQM1	P53228	333 aa	Predicted RBP	2.6	□□□□□ -1.99
YUH1	YJR099W	YNR077C	P53758	84 aa		2.6	□□□□□ -1.99
YUH1	YJR099W	VPS71	Q03433	280 aa		2.6	□□□□□ -1.99
YUH1	YJR099W	RRP17	Q04031	235 aa	Predicted RBP	2.6	□□□□□ -1.99
YUH1	YJR099W	FSF1	Q12029	327 aa	Known RBP	2.6	□□□□□ -1.99
YUH1	YJR099W	NSP1	P14907	823 aa	Known RBP	2.59	□□□□□ -1.99
YUH1	YJR099W	PEX4	P29340	183 aa		2.59	□□□□□ -1.99
YUH1	YJR099W	YOR062C	P36025	268 aa		2.59	□□□□□ -1.99
YUH1	YJR099W	PHO88	P38264	188 aa	Predicted RBP	2.59	□□□□□ -1.99
YUH1	YJR099W	YPR127W	Q06494	345 aa		2.59	□□□□□ -1.99
YUH1	YJR099W	YDL180W	Q12301	547 aa		2.59	□□□□□ -1.99
YUH1	YJR099W	YLR412C-A	Q3E742	68 aa		2.59	□□□□□ -1.99
YUH1	YJR099W	PET54	P10834	293 aa		2.58	□□□□□ -2
YUH1	YJR099W	CSH1	P38287	376 aa		2.58	□□□□□ -2
YUH1	YJR099W	YNL217W	P40152	326 aa		2.58	□□□□□ -2
YUH1	YJR099W	TTI2	P47168	421 aa		2.58	□□□□□ -2
YUH1	YJR099W	DAS2	Q12084	232 aa		2.58	□□□□□ -2
YUH1	YJR099W	EFG1	Q3E705	233 aa	Known RBP	2.58	□□□□□ -2
YUH1	YJR099W	TVP23	P38962	199 aa		2.57	□□□□□ -2
YUH1	YJR099W	ERJ5	P43613	295 aa	Predicted RBP	2.57	□□□□□ -2
YUH1	YJR099W	LSM1	P47017	172 aa	Known RBP	2.57	□□□□□ -2
YUH1	YJR099W	YJL027C	P47063	138 aa	Predicted RBP	2.57	□□□□□ -2
YUH1	YJR099W	XPT1	P47165	209 aa		2.57	□□□□□ -2
YUH1	YJR099W	SBH1	P52870	82 aa		2.57	□□□□□ -2
YUH1	YJR099W	BOL2	P53082	120 aa		2.57	□□□□□ -2
YUH1	YJR099W	MPC3	P53311	146 aa		2.57	□□□□□ -2
YUH1	YJR099W	YMR295C	Q03559	197 aa		2.57	□□□□□ -2
YUH1	YJR099W	THI74	Q04083	370 aa		2.57	□□□□□ -2
YUH1	YJR099W	FYV12	Q08559	129 aa		2.57	□□□□□ -2
YUH1	YJR099W	YPR202W	Q08993	238 aa		2.57	□□□□□ -2
YUH1	YJR099W	PBI2	P0CT04	75 aa	Known RBP	2.56	□□□□□ -2
YUH1	YJR099W	TIR1	P10863	254 aa		2.56	□□□□□ -2
YUH1	YJR099W	SCL1	P21243	252 aa	Known RBP	2.56	□□□□□ -2
YUH1	YJR099W	PEX34	P25584	144 aa		2.56	□□□□□ -2
YUH1	YJR099W	UTR5	P32630	166 aa		2.56	□□□□□ -2
YUH1	YJR099W	SLM6	P38343	150 aa		2.56	□□□□□ -2
YUH1	YJR099W	ERG25	P53045	309 aa		2.56	□□□□□ -2
YUH1	YJR099W	TIM13	P53299	105 aa		2.56	□□□□□ -2
YUH1	YJR099W	YDC1	Q02896	317 aa		2.56	□□□□□ -2
YUH1	YJR099W	SHH3	Q04487	196 aa		2.56	□□□□□ -2
YUH1	YJR099W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
YUH1	YJR099W	UBI4	P0CG63	381 aa	Known RBP	2.55	□□□□□ -2
YUH1	YJR099W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
YUH1	YJR099W	YAP3	P38749	330 aa		2.55	□□□□□ -2
YUH1	YJR099W	YHR022C	P38763	256 aa		2.55	□□□□□ -2
YUH1	YJR099W	SOK1	P40317	901 aa		2.55	□□□□□ -2
YUH1	YJR099W	CUP9	P41817	306 aa		2.55	□□□□□ -2
YUH1	YJR099W	DIG2	Q03373	323 aa	Known RBP	2.55	□□□□□ -2
YUH1	YJR099W	ATG40	Q99325	256 aa		2.55	□□□□□ -2
YUH1	YJR099W	CPR5	P35176	225 aa		2.54	□□□□□ -2
YUH1	YJR099W	YBR209W	P38311	105 aa		2.54	□□□□□ -2
YUH1	YJR099W	SPC25	P40014	221 aa		2.54	□□□□□ -2
YUH1	YJR099W	NSA2	P40078	261 aa	Known RBP	2.54	□□□□□ -2
YUH1	YJR099W	MOG1	P47123	218 aa		2.54	□□□□□ -2
YUH1	YJR099W	DAD3	P69850	94 aa		2.54	□□□□□ -2
YUH1	YJR099W	CYT2	Q00873	224 aa		2.54	□□□□□ -2
YUH1	YJR099W	YOR214C	Q12282	236 aa		2.54	□□□□□ -2
YUH1	YJR099W	RPL2A	P0CX45	254 aa	Known RBP	2.53	□□□□□ -2
YUH1	YJR099W	RPL2B	P0CX46	254 aa	Known RBP	2.53	□□□□□ -2
YUH1	YJR099W	FZF1	P32805	299 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms