RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C ISD11Q6Q560 94 aa4.43□□□□□ -1.7
VPS72YDR485C CTR2P38865 189 aa4.43□□□□□ -1.7
VPS72YDR485C FIS1P40515 155 aa4.43□□□□□ -1.7
VPS72YDR485C YGR219WP53307 113 aa4.43□□□□□ -1.7
VPS72YDR485C YML100W-AQ8TGT0 57 aa4.43□□□□□ -1.7
VPS72YDR485C TAD3Q9URQ3 322 aa4.43□□□□□ -1.7
VPS72YDR485C FCF1Q05498 189 aaPredicted RBP4.42□□□□□ -1.7
VPS72YDR485C SLO1Q3E784 85 aa4.42□□□□□ -1.7
VPS72YDR485C RPL9AP05738 191 aaKnown RBP4.42□□□□□ -1.7
VPS72YDR485C GPI18P38211 433 aa4.42□□□□□ -1.7
VPS72YDR485C VTC1P40046 129 aaRIP-Chip data4.42□□□□□ -1.7not detected
VPS72YDR485C OST2P46964 130 aa4.42□□□□□ -1.7
VPS72YDR485C RPL9BP51401 191 aaKnown RBP4.42□□□□□ -1.7
VPS72YDR485C URA5P13298 226 aaKnown RBP4.41□□□□□ -1.7
VPS72YDR485C COS8P38723 381 aa4.41□□□□□ -1.7
VPS72YDR485C NSG1P38837 291 aa4.41□□□□□ -1.7
VPS72YDR485C YAR068WP39564 161 aa4.41□□□□□ -1.7
VPS72YDR485C TIF34P40217 347 aaKnown RBP4.41□□□□□ -1.7
VPS72YDR485C GLR1P41921 483 aaKnown RBP4.41□□□□□ -1.7
VPS72YDR485C XPT1P47165 209 aa4.41□□□□□ -1.7
VPS72YDR485C DIG2Q03373 323 aaKnown RBP4.41□□□□□ -1.7
VPS72YDR485C RUB1Q03919 77 aa4.41□□□□□ -1.7
VPS72YDR485C YMR230W-AQ3E7B5 62 aa4.41□□□□□ -1.7
VPS72YDR485C SPT14P32363 452 aa4.41□□□□□ -1.7
VPS72YDR485C YOR304C-AO14468 76 aa4.4□□□□□ -1.7
VPS72YDR485C RPS20P38701 121 aaKnown RBP4.4□□□□□ -1.7
VPS72YDR485C FYV4P38783 130 aaPredicted RBP4.4□□□□□ -1.7
VPS72YDR485C ERJ5P43613 295 aaPredicted RBP4.4□□□□□ -1.7
VPS72YDR485C ALB1P47019 175 aaPredicted RBP4.4□□□□□ -1.7
VPS72YDR485C SLM2P53955 656 aa4.4□□□□□ -1.7
VPS72YDR485C ARL3Q02804 198 aa4.4□□□□□ -1.7
VPS72YDR485C NUP157P40064 1391 aaKnown RBP4.4□□□□□ -1.7
VPS72YDR485C YEL009C-AA0A023PZF2 135 aa4.4□□□□□ -1.71
VPS72YDR485C SMD3P43321 101 aaKnown RBP4.4□□□□□ -1.71
VPS72YDR485C KIN28P06242 306 aa4.39□□□□□ -1.71
VPS72YDR485C CCA1P21269 546 aa4.39□□□□□ -1.71
VPS72YDR485C MRP49P32388 137 aa4.39□□□□□ -1.71
VPS72YDR485C YPT53P36019 220 aa4.39□□□□□ -1.71
VPS72YDR485C PRE5P40302 234 aaKnown RBP4.39□□□□□ -1.71
VPS72YDR485C VPS71Q03433 280 aa4.39□□□□□ -1.71
VPS72YDR485C SKG1P36169 355 aa4.39□□□□□ -1.71
VPS72YDR485C ALG9P53868 555 aaKnown RBP4.39□□□□□ -1.71
VPS72YDR485C SMD1Q02260 146 aaPredicted RBP4.39□□□□□ -1.71
VPS72YDR485C ATP14Q12349 124 aa4.39□□□□□ -1.71
VPS72YDR485C ATP5P09457 212 aa4.38□□□□□ -1.71
VPS72YDR485C LHP1P33399 275 aaKnown RBP4.38□□□□□ -1.71
VPS72YDR485C YER181CP40097 107 aa4.38□□□□□ -1.71
VPS72YDR485C YDR366CP87287 132 aa4.38□□□□□ -1.71
VPS72YDR485C FYV12Q08559 129 aa4.38□□□□□ -1.71
VPS72YDR485C YLR412C-AQ3E742 68 aa4.38□□□□□ -1.71
VPS72YDR485C YRA2P36036 203 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
VPS72YDR485C YJL218WP40892 196 aaKnown RBP4.38□□□□□ -1.71
VPS72YDR485C MRPS16Q02608 121 aa4.38□□□□□ -1.71
VPS72YDR485C NKP2Q06162 153 aa4.38□□□□□ -1.71
VPS72YDR485C CNL1Q06333 122 aa4.38□□□□□ -1.71
VPS72YDR485C SNT2P53127 1403 aa4.37□□□□□ -1.71
VPS72YDR485C HYM1P32464 399 aa4.37□□□□□ -1.71
VPS72YDR485C SHE2P36068 246 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
VPS72YDR485C YHR125WP38831 101 aa4.37□□□□□ -1.71
VPS72YDR485C AVT2P39981 480 aa4.37□□□□□ -1.71
VPS72YDR485C PGD1P40356 397 aa4.37□□□□□ -1.71
VPS72YDR485C SDH7Q04401 133 aa4.37□□□□□ -1.71
VPS72YDR485C RAD10P06838 210 aa4.36□□□□□ -1.71
VPS72YDR485C PTC1P35182 281 aa4.36□□□□□ -1.71
VPS72YDR485C PAN3P36102 679 aaPredicted RBP4.36□□□□□ -1.71
VPS72YDR485C ECM34P38728 170 aa4.36□□□□□ -1.71
VPS72YDR485C LDB18Q07887 179 aa4.36□□□□□ -1.71
VPS72YDR485C YLR099W-AQ3E798 87 aa4.36□□□□□ -1.71
VPS72YDR485C TIM9O74700 87 aa4.36□□□□□ -1.71
VPS72YDR485C RPC19P28000 142 aaKnown RBP4.36□□□□□ -1.71
VPS72YDR485C FMP46P36141 133 aaKnown RBP4.35□□□□□ -1.71
VPS72YDR485C MRPL17P36528 281 aa4.35□□□□□ -1.71
VPS72YDR485C FCY21P40039 528 aa4.35□□□□□ -1.71
VPS72YDR485C YDR274CP87283 123 aa4.35□□□□□ -1.71
VPS72YDR485C SPG3Q04398 127 aaPredicted RBP4.35□□□□□ -1.71
VPS72YDR485C PRP11Q07350 266 aaPredicted RBP4.35□□□□□ -1.71
VPS72YDR485C YAR023CD6VPM8 179 aa4.35□□□□□ -1.71
VPS72YDR485C ADK1P07170 222 aaKnown RBP4.35□□□□□ -1.71
VPS72YDR485C ADH3P07246 375 aaKnown RBP4.35□□□□□ -1.71
VPS72YDR485C VMA7P39111 118 aa4.35□□□□□ -1.71
VPS72YDR485C AIM2P39721 246 aa4.35□□□□□ -1.71
VPS72YDR485C YGR039WP53225 103 aa4.35□□□□□ -1.71
VPS72YDR485C TIR1P10863 254 aa4.34□□□□□ -1.71
VPS72YDR485C VMA11P32842 164 aa4.34□□□□□ -1.71
VPS72YDR485C UTP11P34247 250 aaPredicted RBP4.34□□□□□ -1.71
VPS72YDR485C CGI121Q03705 181 aaKnown RBP4.34□□□□□ -1.71
VPS72YDR485C MRPL24P36525 258 aaPredicted RBP4.34□□□□□ -1.72
VPS72YDR485C HHO1P53551 258 aa4.34□□□□□ -1.72
VPS72YDR485C YER134CP40081 178 aa4.33□□□□□ -1.72
VPS72YDR485C YOR268CQ08734 132 aa4.33□□□□□ -1.72
VPS72YDR485C AUS1Q08409 1394 aa4.33□□□□□ -1.72
VPS72YDR485C YCR101CP25607 182 aa4.33□□□□□ -1.72
VPS72YDR485C YHR140WP38842 239 aa4.33□□□□□ -1.72
VPS72YDR485C ARC15P40518 154 aaRIP-Chip data4.33□□□□□ -1.72not detected
VPS72YDR485C RSM27P53305 110 aa4.33□□□□□ -1.72
VPS72YDR485C YOR214CQ12282 236 aa4.33□□□□□ -1.72
VPS72YDR485C FMP49A0A023PZB3 126 aa4.32□□□□□ -1.72
VPS72YDR485C CBP6P07253 162 aaPredicted RBP4.32□□□□□ -1.72
VPS72YDR485C TFC1P32367 649 aa4.32□□□□□ -1.72
VPS72YDR485C YKR070WP36151 352 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms