RNA–Protein interactions for RNA: YDL110C

TMA17, Transcript of ATPase dedicated chaperone that adapts proteasome assembly to stress, yeast

Gene TMA17, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA17	YDL110C	YER137C	P40083	148 aa	Known RBP	3.15	□□□□□ -1.91
TMA17	YDL110C	BUL1	P48524	976 aa		3.15	□□□□□ -1.91
TMA17	YDL110C	GTF1	P53260	183 aa	Predicted RBP	3.15	□□□□□ -1.91
TMA17	YDL110C	CPD1	P53314	239 aa		3.15	□□□□□ -1.91
TMA17	YDL110C	RTT103	Q05543	409 aa		3.15	□□□□□ -1.91
TMA17	YDL110C	YOL029C	Q08187	201 aa		3.15	□□□□□ -1.91
TMA17	YDL110C	GEP3	Q08622	556 aa		3.15	□□□□□ -1.91
TMA17	YDL110C	QCR2	P07257	368 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	SPT14	P32363	452 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	QDR3	P38227	689 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	YBR184W	P38299	523 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	GET2	P40056	285 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	IRC24	P40580	263 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	SER2	P42941	309 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	YPI1	P43587	155 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	AIM25	P47140	327 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	RAI1	P53063	387 aa	Known RBP	3.14	□□□□□ -1.91
TMA17	YDL110C	NIF3	P53081	288 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	MSO1	P53604	210 aa	Known RBP	3.14	□□□□□ -1.91
TMA17	YDL110C	GIM3	P53900	129 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	SMX3	P54999	86 aa	Predicted RBP	3.14	□□□□□ -1.91
TMA17	YDL110C	LRS4	Q04087	347 aa	Known RBP	3.14	□□□□□ -1.91
TMA17	YDL110C	PHO92	Q06390	306 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	YNG1	Q08465	219 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	YOR352W	Q08816	343 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	FEX2	Q08991	375 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	RAD28	Q12021	506 aa		3.14	□□□□□ -1.91
TMA17	YDL110C	COX2	P00410	251 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	ALK2	P32789	676 aa	Predicted RBP	3.13	□□□□□ -1.91
TMA17	YDL110C	NRG2	P38082	220 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	LAG1	P38703	411 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	LSM12	P38828	187 aa	Known RBP	3.13	□□□□□ -1.91
TMA17	YDL110C	TPN1	P53099	579 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	YGR050C	P53231	118 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	SSU72	P53538	206 aa	Predicted RBP	3.13	□□□□□ -1.91
TMA17	YDL110C	NCE103	P53615	221 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	SWT21	P53873	357 aa	Predicted RBP	3.13	□□□□□ -1.91
TMA17	YDL110C	LSM7	P53905	115 aa	Known RBP	3.13	□□□□□ -1.91
TMA17	YDL110C	DYN2	Q02647	92 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	ATG39	Q06159	398 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	TDA6	Q06466	467 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	FEX1	Q08913	375 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	HTZ1	Q12692	134 aa	Known RBP	3.13	□□□□□ -1.91
TMA17	YDL110C	YGL258W-A	Q3E740	77 aa		3.13	□□□□□ -1.91
TMA17	YDL110C	GRX2	P17695	143 aa	Known RBP	3.12	□□□□□ -1.91
TMA17	YDL110C	MRP17	P28778	131 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	ECM33	P38248	429 aa	Known RBP	3.12	□□□□□ -1.91
TMA17	YDL110C	ERV15	P38312	142 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	DOG2	P38773	246 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	DOG1	P38774	246 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	YJL027C	P47063	138 aa	Predicted RBP	3.12	□□□□□ -1.91
TMA17	YDL110C	HAM1	P47119	197 aa	Known RBP	3.12	□□□□□ -1.91
TMA17	YDL110C	YGR018C	P53211	109 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	EST3	Q03096	181 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	TRI1	Q05024	226 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	RXT3	Q07458	294 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	TIM18	Q08749	192 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	YCT1	Q12235	531 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	ATG31	Q12421	196 aa		3.12	□□□□□ -1.91
TMA17	YDL110C	TPI1	P00942	248 aa	Known RBP	3.11	□□□□□ -1.91
TMA17	YDL110C	GPM1	P00950	247 aa	Known RBP	3.11	□□□□□ -1.91
TMA17	YDL110C	CYC3	P06182	269 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	YCR016W	P25617	290 aa	Known RBP	3.11	□□□□□ -1.91
TMA17	YDL110C	POP5	P28005	173 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	RRT1	P38192	103 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	CDS1	P38221	457 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	WSS1	P38838	269 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
TMA17	YDL110C	SNU13	P39990	126 aa	Known RBP	3.11	□□□□□ -1.91
TMA17	YDL110C	SIM1	P40472	476 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	HCH1	P53834	153 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	VPS28	Q02767	242 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	FRQ1	Q06389	190 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	PAM18	Q07914	168 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	ENV7	Q12003	364 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	PRM4	Q12498	284 aa		3.11	□□□□□ -1.91
TMA17	YDL110C	RPN13	O13563	156 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	MRS3	P10566	314 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	NHP6B	P11633	99 aa	Known RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	URA5	P13298	226 aa	Known RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	YKL162C	P36052	402 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	YBL071C	P38185	102 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	MST28	P39552	234 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	NSA2	P40078	261 aa	Known RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	POR2	P40478	281 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	AGX1	P43567	385 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	TDA4	P47153	279 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	MIC26	P50087	233 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	ARO8	P53090	500 aa	Known RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	MST27	P53176	234 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	ERV25	P54837	211 aa	Known RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	YLR224W	Q05947	369 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	YDR215C	Q12240	137 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	POC4	Q12245	148 aa	Predicted RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	YPS3	Q12303	508 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	TRM13	Q12383	476 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	RDI1	Q12434	202 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	PAA1	Q12447	191 aa	Known RBP	3.1	□□□□□ -1.91
TMA17	YDL110C	AGC1	Q12482	902 aa		3.1	□□□□□ -1.91
TMA17	YDL110C	ARG80	P07249	177 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms