RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C EOS1P53938 366 aa2.5□□□□□ -2.01
RIF1YBR275C ECM23Q02710 187 aa2.5□□□□□ -2.01
RIF1YBR275C YOR186WQ08560 144 aa2.5□□□□□ -2.01
RIF1YBR275C YDR034C-AP0C289 58 aa2.5□□□□□ -2.01
RIF1YBR275C SPO11P23179 398 aa2.5□□□□□ -2.01
RIF1YBR275C ZRT3P34240 503 aa2.5□□□□□ -2.01
RIF1YBR275C SDH4P37298 181 aa2.5□□□□□ -2.01
RIF1YBR275C ERV15P38312 142 aa2.5□□□□□ -2.01
RIF1YBR275C UBP8P50102 471 aa2.5□□□□□ -2.01
RIF1YBR275C LST7P53237 242 aa2.5□□□□□ -2.01
RIF1YBR275C PHO92Q06390 306 aa2.5□□□□□ -2.01
RIF1YBR275C MRS1P07266 363 aa2.5□□□□□ -2.01
RIF1YBR275C ATP5P09457 212 aa2.5□□□□□ -2.01
RIF1YBR275C MXR2P25566 168 aa2.5□□□□□ -2.01
RIF1YBR275C CDC50P25656 391 aa2.5□□□□□ -2.01
RIF1YBR275C BDH1P39714 382 aa2.5□□□□□ -2.01
RIF1YBR275C YJR096WP47137 282 aa2.5□□□□□ -2.01
RIF1YBR275C CAF40P53829 373 aa2.5□□□□□ -2.01
RIF1YBR275C TAD3Q9URQ3 322 aa2.5□□□□□ -2.01
RIF1YBR275C HIR3P47171 1648 aa2.5□□□□□ -2.01
RIF1YBR275C RPS21AP0C0V8 87 aaKnown RBP2.5□□□□□ -2.01
RIF1YBR275C TOA2P32774 122 aa2.5□□□□□ -2.01
RIF1YBR275C PRE5P40302 234 aaKnown RBP2.5□□□□□ -2.01
RIF1YBR275C YPS5P53057 165 aa2.5□□□□□ -2.01
RIF1YBR275C NRM1P53718 249 aa2.5□□□□□ -2.01
RIF1YBR275C RPA190P10964 1664 aaKnown RBP2.5□□□□□ -2.01
RIF1YBR275C RRP7P25368 297 aaPredicted RBP2.49□□□□□ -2.01
RIF1YBR275C SPO23P33757 523 aa2.49□□□□□ -2.01
RIF1YBR275C MRX5P47007 382 aa2.49□□□□□ -2.01
RIF1YBR275C APS2Q00381 147 aa2.49□□□□□ -2.01
RIF1YBR275C YPL014WQ02606 381 aa2.49□□□□□ -2.01
RIF1YBR275C COQ10Q08058 207 aa2.49□□□□□ -2.01
RIF1YBR275C YOR292CQ08743 309 aa2.49□□□□□ -2.01
RIF1YBR275C VTH1P40438 1549 aa2.49□□□□□ -2.01
RIF1YBR275C VTH2P40890 1549 aa2.49□□□□□ -2.01
RIF1YBR275C MON2P48563 1636 aaPredicted RBP2.49□□□□□ -2.01
RIF1YBR275C GPI18P38211 433 aa2.49□□□□□ -2.01
RIF1YBR275C YNL217WP40152 326 aa2.49□□□□□ -2.01
RIF1YBR275C YMR187CQ03236 431 aa2.49□□□□□ -2.01
RIF1YBR275C UPS3Q04006 179 aa2.49□□□□□ -2.01
RIF1YBR275C MSA1Q08471 629 aa2.49□□□□□ -2.01
RIF1YBR275C ENV10Q99382 181 aa2.49□□□□□ -2.01
RIF1YBR275C MRP2P10663 115 aaPredicted RBP2.49□□□□□ -2.01
RIF1YBR275C ISF1P32488 338 aa2.49□□□□□ -2.01
RIF1YBR275C RRP4P38792 359 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C AIM10P39965 576 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C DSE1P40077 573 aa2.49□□□□□ -2.01
RIF1YBR275C RIO2P40160 425 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C YIL165CP40446 119 aa2.49□□□□□ -2.01
RIF1YBR275C GVP36P40531 326 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C GPG1P53130 126 aa2.49□□□□□ -2.01
RIF1YBR275C BOR1P53838 576 aa2.49□□□□□ -2.01
RIF1YBR275C HSK3P69852 69 aa2.49□□□□□ -2.01
RIF1YBR275C IZH1Q03419 316 aa2.49□□□□□ -2.01
RIF1YBR275C TPT1Q12272 230 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C YCR043CP25361 127 aa2.49□□□□□ -2.01
RIF1YBR275C PMU1P36069 295 aa2.49□□□□□ -2.01
RIF1YBR275C AIM29P36154 155 aa2.49□□□□□ -2.01
RIF1YBR275C YER079WP40052 210 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C ARP3P47117 449 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C DAN1P47178 298 aa2.49□□□□□ -2.01
RIF1YBR275C ACT1P60010 375 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C AAT1Q01802 451 aa2.49□□□□□ -2.01
RIF1YBR275C SPG4Q04438 115 aa2.49□□□□□ -2.01
RIF1YBR275C MCH1Q07376 486 aa2.49□□□□□ -2.01
RIF1YBR275C YOL163WP0CF20 169 aa2.49□□□□□ -2.01
RIF1YBR275C MATALPHA1P0CY06 175 aa2.49□□□□□ -2.01
RIF1YBR275C HMLALPHA1P0CY07 175 aa2.49□□□□□ -2.01
RIF1YBR275C VTC1P40046 129 aaRIP-Chip data2.49□□□□□ -2.01not detected
RIF1YBR275C URM1P40554 99 aaPredicted RBP2.49□□□□□ -2.01
RIF1YBR275C TOM7P53507 60 aa2.49□□□□□ -2.01
RIF1YBR275C CTK1Q03957 528 aaKnown RBP2.49□□□□□ -2.01
RIF1YBR275C YMR253CQ04835 414 aa2.49□□□□□ -2.01
RIF1YBR275C BOL1Q3E793 110 aa2.49□□□□□ -2.01
RIF1YBR275C YBL112CQ3E7Y4 105 aa2.49□□□□□ -2.01
RIF1YBR275C MRS3P10566 314 aa2.48□□□□□ -2.01
RIF1YBR275C CBF1P17106 351 aa2.48□□□□□ -2.01
RIF1YBR275C GCD7P32502 381 aaPredicted RBP2.48□□□□□ -2.01
RIF1YBR275C MGM101P32787 269 aaKnown RBP2.48□□□□□ -2.01
RIF1YBR275C SFK1P35735 353 aa2.48□□□□□ -2.01
RIF1YBR275C MRPS9P38120 278 aa2.48□□□□□ -2.01
RIF1YBR275C YEL073CP39974 107 aa2.48□□□□□ -2.01
RIF1YBR275C YER135CP40082 130 aa2.48□□□□□ -2.01
RIF1YBR275C DIE2P50076 525 aa2.48□□□□□ -2.01
RIF1YBR275C TPC1P53257 314 aa2.48□□□□□ -2.01
RIF1YBR275C YMR321CQ04898 105 aa2.48□□□□□ -2.01
RIF1YBR275C PAU19P0CE85 124 aa2.48□□□□□ -2.01
RIF1YBR275C PAU3P25610 124 aa2.48□□□□□ -2.01
RIF1YBR275C PAU16P35994 123 aa2.48□□□□□ -2.01
RIF1YBR275C MSL1P40567 111 aaPredicted RBP2.48□□□□□ -2.01
RIF1YBR275C PAU15P40585 124 aa2.48□□□□□ -2.01
RIF1YBR275C YFR035CP43608 114 aa2.48□□□□□ -2.01
RIF1YBR275C BRP1P53194 125 aa2.48□□□□□ -2.01
RIF1YBR275C YDR391CQ04170 232 aa2.48□□□□□ -2.01
RIF1YBR275C PAU17Q12370 124 aa2.48□□□□□ -2.01
RIF1YBR275C RPL14AP36105 138 aaKnown RBP2.48□□□□□ -2.01
RIF1YBR275C RPL14BP38754 138 aaKnown RBP2.48□□□□□ -2.01
RIF1YBR275C YIL012WP40551 113 aa2.48□□□□□ -2.01
RIF1YBR275C YNL234WP53857 426 aa2.48□□□□□ -2.01
RIF1YBR275C PIR1Q03178 341 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms