RNA–Protein interactions for RNA: YAL020C

ATS1, Protein required for modification of wobble nucleosides in tRNA, yeastyeast

Gene ATS1, Length 1,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATS1YAL020C FMP42Q04991 504 aa11.54□□□□□ -0.56
ATS1YAL020C PAM18Q07914 168 aa11.54□□□□□ -0.56
ATS1YAL020C NGL1Q08213 363 aaKnown RBP11.54□□□□□ -0.56
ATS1YAL020C GEP3Q08622 556 aa11.54□□□□□ -0.56
ATS1YAL020C ATG5Q12380 294 aa11.53□□□□□ -0.56
ATS1YAL020C YBR255C-AQ3E776 120 aa11.53□□□□□ -0.56
ATS1YAL020C CYC1P00044 109 aaPredicted RBP11.52□□□□□ -0.57
ATS1YAL020C PET494P07390 489 aaPredicted RBP11.52□□□□□ -0.57
ATS1YAL020C YCP4P25349 247 aaKnown RBP11.52□□□□□ -0.57
ATS1YAL020C IPI1P38803 334 aaPredicted RBP11.52□□□□□ -0.57
ATS1YAL020C DFG10P40526 253 aa11.52□□□□□ -0.57
ATS1YAL020C SCW10Q04951 389 aa11.52□□□□□ -0.57
ATS1YAL020C PEX10Q05568 337 aa11.52□□□□□ -0.57
ATS1YAL020C CAP2P13517 287 aa11.51□□□□□ -0.57
ATS1YAL020C IMD2P38697 523 aaKnown RBP11.51□□□□□ -0.57
ATS1YAL020C BUL1P48524 976 aa11.51□□□□□ -0.57
ATS1YAL020C CWC23P52868 283 aaPredicted RBP11.51□□□□□ -0.57
ATS1YAL020C CAX4P53223 239 aa11.51□□□□□ -0.57
ATS1YAL020C YGL258W-AQ3E740 77 aa11.51□□□□□ -0.57
ATS1YAL020C RAI1P53063 387 aaKnown RBP11.5□□□□□ -0.57
ATS1YAL020C SMX3P54999 86 aaPredicted RBP11.5□□□□□ -0.57
ATS1YAL020C RAD28Q12021 506 aa11.5□□□□□ -0.57
ATS1YAL020C PDC2P32896 925 aa11.49□□□□□ -0.57
ATS1YAL020C YAR068WP39564 161 aa11.49□□□□□ -0.57
ATS1YAL020C SWT21P53873 357 aaPredicted RBP11.49□□□□□ -0.57
ATS1YAL020C PRM4Q12498 284 aa11.49□□□□□ -0.57
ATS1YAL020C QCR2P07257 368 aa11.48□□□□□ -0.57
ATS1YAL020C QDR3P38227 689 aa11.48□□□□□ -0.57
ATS1YAL020C BFR1P38934 470 aaKnown RBP RIP-Chip data11.48□□□□□ -0.57not detected
ATS1YAL020C YGR210CP42942 411 aa11.48□□□□□ -0.57
ATS1YAL020C YPI1P43587 155 aa11.48□□□□□ -0.57
ATS1YAL020C NCE103P53615 221 aa11.48□□□□□ -0.57
ATS1YAL020C LSM7P53905 115 aaKnown RBP11.48□□□□□ -0.57
ATS1YAL020C GPM1P00950 247 aaKnown RBP11.47□□□□□ -0.57
ATS1YAL020C ALK2P32789 676 aaPredicted RBP11.47□□□□□ -0.57
ATS1YAL020C HAM1P47119 197 aaKnown RBP11.47□□□□□ -0.57
ATS1YAL020C EST3Q03096 181 aa11.47□□□□□ -0.57
ATS1YAL020C ERV15P38312 142 aa11.46□□□□□ -0.57
ATS1YAL020C ERV25P54837 211 aaKnown RBP11.46□□□□□ -0.57
ATS1YAL020C RDI1Q12434 202 aa11.46□□□□□ -0.57
ATS1YAL020C TAR1Q8TGM6 124 aa11.46□□□□□ -0.57
ATS1YAL020C DOG2P38773 246 aa11.45□□□□□ -0.58
ATS1YAL020C DOG1P38774 246 aa11.45□□□□□ -0.58
ATS1YAL020C TPN1P53099 579 aa11.45□□□□□ -0.58
ATS1YAL020C YDR215CQ12240 137 aa11.45□□□□□ -0.58
ATS1YAL020C RPN13O13563 156 aa11.44□□□□□ -0.58
ATS1YAL020C SPT14P32363 452 aa11.44□□□□□ -0.58
ATS1YAL020C YER137CP40083 148 aaKnown RBP11.44□□□□□ -0.58
ATS1YAL020C TRI1Q05024 226 aa11.44□□□□□ -0.58
ATS1YAL020C DYN2Q02647 92 aa11.43□□□□□ -0.58
ATS1YAL020C FEX2Q08991 375 aa11.43□□□□□ -0.58
ATS1YAL020C YPR013CQ12145 317 aa11.43□□□□□ -0.58
ATS1YAL020C URA5P13298 226 aaKnown RBP11.42□□□□□ -0.58
ATS1YAL020C UTP11P34247 250 aaPredicted RBP11.42□□□□□ -0.58
ATS1YAL020C CYC3P06182 269 aa11.41□□□□□ -0.58
ATS1YAL020C CDS1P38221 457 aa11.41□□□□□ -0.58
ATS1YAL020C AGX1P43567 385 aa11.41□□□□□ -0.58
ATS1YAL020C NIF3P53081 288 aa11.41□□□□□ -0.58
ATS1YAL020C ARO8P53090 500 aaKnown RBP11.41□□□□□ -0.58
ATS1YAL020C YGR050CP53231 118 aa11.41□□□□□ -0.58
ATS1YAL020C VPS28Q02767 242 aa11.41□□□□□ -0.58
ATS1YAL020C RRG8Q06109 277 aa11.41□□□□□ -0.58
ATS1YAL020C RXT3Q07458 294 aa11.41□□□□□ -0.58
ATS1YAL020C YCR016WP25617 290 aaKnown RBP11.4□□□□□ -0.58
ATS1YAL020C PHO92Q06390 306 aa11.4□□□□□ -0.58
ATS1YAL020C YCT1Q12235 531 aa11.4□□□□□ -0.58
ATS1YAL020C NSA2P40078 261 aaKnown RBP11.39□□□□□ -0.59
ATS1YAL020C YOR352WQ08816 343 aa11.39□□□□□ -0.59
ATS1YAL020C MRP17P28778 131 aa11.38□□□□□ -0.59
ATS1YAL020C SRL3P36167 246 aa11.38□□□□□ -0.59
ATS1YAL020C RRT1P38192 103 aa11.38□□□□□ -0.59
ATS1YAL020C ATG39Q06159 398 aa11.38□□□□□ -0.59
ATS1YAL020C FEX1Q08913 375 aa11.38□□□□□ -0.59
ATS1YAL020C TY1A-HP0C2I4 478 aaKnown RBP11.37□□□□□ -0.59
ATS1YAL020C NRG2P38082 220 aa11.37□□□□□ -0.59
ATS1YAL020C TRM13Q12383 476 aa11.37□□□□□ -0.59
ATS1YAL020C YBL071CP38185 102 aa11.36□□□□□ -0.59
ATS1YAL020C GPG1P53130 126 aa11.36□□□□□ -0.59
ATS1YAL020C ALG13P53178 202 aa11.36□□□□□ -0.59
ATS1YAL020C MSO1P53604 210 aaKnown RBP11.36□□□□□ -0.59
ATS1YAL020C PAA1Q12447 191 aaKnown RBP11.36□□□□□ -0.59
ATS1YAL020C MRS3P10566 314 aa11.35□□□□□ -0.59
ATS1YAL020C WSS1P38838 269 aa11.35□□□□□ -0.59
ATS1YAL020C SNU13P39990 126 aaKnown RBP11.35□□□□□ -0.59
ATS1YAL020C SIM1P40472 476 aa11.35□□□□□ -0.59
ATS1YAL020C POR2P40478 281 aa11.35□□□□□ -0.59
ATS1YAL020C YLR224WQ05947 369 aa11.35□□□□□ -0.59
ATS1YAL020C TIM18Q08749 192 aa11.35□□□□□ -0.59
ATS1YAL020C RTC3P38804 111 aaPredicted RBP11.34□□□□□ -0.59
ATS1YAL020C MST28P39552 234 aa11.34□□□□□ -0.59
ATS1YAL020C MST27P53176 234 aa11.34□□□□□ -0.59
ATS1YAL020C YPS3Q12303 508 aa11.34□□□□□ -0.59
ATS1YAL020C TPI1P00942 248 aaKnown RBP11.33□□□□□ -0.6
ATS1YAL020C NHP6BP11633 99 aaKnown RBP11.33□□□□□ -0.6
ATS1YAL020C SUA5P32579 426 aa11.33□□□□□ -0.6
ATS1YAL020C TDA4P47153 279 aa11.33□□□□□ -0.6
ATS1YAL020C YAP1802P53309 568 aa11.33□□□□□ -0.6
ATS1YAL020C SPS2P08459 502 aa11.32□□□□□ -0.6
ATS1YAL020C TAL1P15019 335 aaKnown RBP11.32□□□□□ -0.6
ATS1YAL020C YKL162CP36052 402 aa11.32□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms