RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 HYOU1Q9Y4L1 999 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 TARSL2A2RTX5 802 aaKnown RBP11□□□□□ -0.65
PHGDH-224ENST00000641711 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 DDX3XO00571 662 aaKnown RBP eCLIP11□□□□□ -0.65
PHGDH-224ENST00000641711 RB1P06400 928 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 LAG3P18627 525 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 ADSSP30520 456 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 GTF2H1P32780 548 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 PPM1AP35813 382 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 ARID5AQ03989 594 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 PPP3CAQ08209 521 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 GRIK3Q13003 919 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
PHGDH-224ENST00000641711 IFI16Q16666 785 aaKnown RBP11□□□□□ -0.65
PHGDH-224ENST00000641711 XKR4Q5GH76 650 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 NOMO2Q5JPE7 1267 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 CLLU1OSQ5K130 101 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 WDR93Q6P2C0 686 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 SLC39A4Q6P5W5 647 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 ALKBH5Q6P6C2 394 aaKnown RBP11□□□□□ -0.65
PHGDH-224ENST00000641711 GJB7Q6PEY0 223 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 NT5DC4Q86YG4 428 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 NOA1Q8NC60 698 aaKnown RBP11□□□□□ -0.65
PHGDH-224ENST00000641711 TIFAQ96CG3 184 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 MFSD14AQ96MC6 490 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 OSBPL9Q96SU4 736 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 MMS19Q96T76 1030 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 PLVAPQ9BX97 442 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 TLR10Q9BXR5 811 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 EPC1Q9H2F5 836 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 NXF3Q9H4D5 531 aaKnown RBP11□□□□□ -0.65
PHGDH-224ENST00000641711 PCIF1Q9H4Z3 704 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 SLC28A3Q9HAS3 691 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 AAASQ9NRG9 546 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 STK39Q9UEW8 545 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 COQ4Q9Y3A0 265 aa11□□□□□ -0.65
PHGDH-224ENST00000641711 TISP43B9A030 160 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 ANKRD63C9JTQ0 380 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 PDE2AO00408 941 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-224ENST00000641711 CES2O00748 559 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 XPOTO43592 962 aaKnown RBP10.99□□□□□ -0.65
PHGDH-224ENST00000641711 FAM189A1O60320 539 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 SRGAP2O75044 1071 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 RECQL4O94761 1208 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 UPP2O95045 317 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 ADRB2P07550 413 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 H2AFZP0C0S5 128 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 PNMA6AP0CW24 399 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-224ENST00000641711 MCM3P25205 808 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 MATR3P43243 847 aaKnown RBP eCLIP10.99□□□□□ -0.65
PHGDH-224ENST00000641711 ERVK-21P61565 698 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 DLG4P78352 724 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 PHLDB3Q6NSJ2 640 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 H2AFVQ71UI9 128 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 USP37Q86T82 979 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 MMGT1Q8N4V1 131 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 RNF169Q8NCN4 708 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 PLEKHO2Q8TD55 490 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 POMGNT1Q8WZA1 660 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 RUBCNQ92622 972 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 SNX27Q96L92 541 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 ACAP3Q96P50 834 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 CASD1Q96PB1 797 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
PHGDH-224ENST00000641711 TMEM175Q9BSA9 504 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 MSTO1Q9BUK6 570 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 ARFGAP3Q9NP61 516 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 SLC38A7Q9NVC3 462 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 CNTN3Q9P232 1028 aa10.99□□□□□ -0.65
PHGDH-224ENST00000641711 AGO2Q9UKV8 859 aaKnown RBP10.99□□□□□ -0.65
PHGDH-224ENST00000641711 GRID2IPA4D2P6 1211 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 LINC01553A4QN01 128 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 ARL5CA6NH57 179 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 TBKBP1A7MCY6 615 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 C5orf67F2Z3F1 127 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 ERLIN1O75477 346 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 PALMO75781 387 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 IL18RAPO95256 599 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 CA3P07451 260 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 FGFR1P11362 822 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 KCNE1P15382 129 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 MXI1P50539 228 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 SURF1Q15526 300 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 ZNF697Q5TEC3 545 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 MEI1Q5TIA1 1274 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 PPP2R2DQ66LE6 453 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 SLFN11Q7Z7L1 901 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 CDR2LQ86X02 465 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 CBWD2Q8IUF1 395 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 BRSK2Q8IWQ3 736 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 KRT222Q8N1A0 295 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 LNX1Q8TBB1 728 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 HELQQ8TDG4 1101 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 PARD3BQ8TEW8 1205 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 CALR3Q96L12 384 aaKnown RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 PNKPQ96T60 521 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 PACSIN1Q9BY11 444 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms