RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 A0A1W2PQ64 194 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 A0A1W2PQD8 194 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 K7ERI5 159 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF197O14709 1029 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF263O14978 683 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 HRO43593 1189 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 CPB1P15086 417 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 CCT6AP40227 531 aaKnown RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 NPTX2P47972 431 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.664e-8■■■□□ 17.3
PHGDH-222ENST00000641587 CCR3P51677 355 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 SIM2Q14190 667 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 ZRSR1Q15695 479 aaKnown RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 IL17AQ16552 155 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 SKOR2Q2VWA4 1001 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 CYP4A22Q5TCH4 519 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF280DQ6N043 979 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 TXNDC11Q6PKC3 985 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 SHC4Q6S5L8 630 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 PRR23CQ6ZRP0 262 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 ERMNQ8TAM6 284 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 DEPDC1BQ8WUY9 529 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 DDX12PQ92771 950 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 KIFAP3Q92845 792 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 SUSD3Q96L08 255 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 PGLYRP2Q96PD5 576 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 SLITRK6Q9H5Y7 841 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 TOPORSQ9NS56 1045 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 SEMA4GQ9NTN9 838 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 DDX19AQ9NUU7 478 aaKnown RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 CNTN3Q9P232 1028 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 LRWD1Q9UFC0 647 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 YIPF1Q9Y548 306 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-222ENST00000641587 CHD8Q9HCK8 2581 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 A0A1W2PRU2 124 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 PP2D1A8MPX8 630 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 E9PMD0 336 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 H7C4K7 107 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 K7ESF4 209 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 SLC30A4O14863 429 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 TRAK2O60296 914 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 HIP1RO75146 1068 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 MICAL2O94851 1124 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 RETP07949 1114 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 KCNE1P15382 129 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 PFKFB1P16118 471 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 PROZP22891 400 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 CMA1P23946 247 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 UBA7P41226 1012 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 CXCL12P48061 93 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 CDR1P51861 262 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 EPHA5P54756 1037 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 NRLP54845 237 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 SPAG1Q07617 926 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 MAPK7Q13164 816 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 CCDC6Q16204 474 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ST3GAL2Q16842 350 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 TPGS2Q68CL5 300 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 IQCEQ6IPM2 695 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 TMC8Q8IU68 726 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 MFSD6LQ8IWD5 586 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ELMOD1Q8N336 334 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 TTC9BQ8N6N2 239 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 CELF5Q8N6W0 485 aaKnown RBP10.9□□□□□ -0.66
PHGDH-222ENST00000641587 GPT2Q8TD30 523 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 NETO1Q8TDF5 533 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 SNX29Q8TEQ0 813 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 CDK5RAP3Q96JB5 506 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ZFYVE19Q96K21 471 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 AK8Q96MA6 479 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF512Q96ME7 567 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ACAP3Q96P50 834 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 LRRC3BQ96PB8 259 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 RUSC1Q9BVN2 902 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 LRRC3Q9BY71 257 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 MRPL4Q9BYD3 311 aaKnown RBP10.9□□□□□ -0.66
PHGDH-222ENST00000641587 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 GOLPH3LQ9H4A5 285 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 TRPV5Q9NQA5 729 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ASAH2Q9NR71 780 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 SLC38A7Q9NVC3 462 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ARHGAP28Q9P2N2 729 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 ANKFY1Q9P2R3 1169 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 AFF4Q9UHB7 1163 aaKnown RBP10.9□□□□□ -0.66
PHGDH-222ENST00000641587 KIAA1024Q9UPX6 916 aa10.9□□□□□ -0.66
PHGDH-222ENST00000641587 LAMA1P25391 3075 aa10.9□□□□□ -0.67
PHGDH-222ENST00000641587 ATG2BQ96BY7 2078 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 ANK1P16157 1881 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 SFI1A8K8P3 1242 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 SLC16A4O15374 487 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 SOAT2O75908 522 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 CDC25AP30304 524 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 SYKP43405 635 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 GUCY2FP51841 1108 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 NDUFA8P51970 172 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 FAM160A1Q05DH4 1040 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 PPP2R5DQ14738 602 aa10.89□□□□□ -0.67
PHGDH-222ENST00000641587 SLC10A6Q3KNW5 377 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms