RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PGLYRP2Q96PD5 576 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 KIFC3Q9BVG8 833 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 GPR88Q9GZN0 384 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 PDCL3Q9H2J4 239 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 TMEM9BQ9NQ34 198 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 CYP46A1Q9Y6A2 500 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 FAM221BA6H8Z2 402 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 ACKR2O00590 384 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 SYN3O14994 580 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 KHNYNO15037 678 aaKnown RBP10.64□□□□□ -0.71
PHGDH-212ENST00000641247 CCNT1O60563 726 aaKnown RBP10.64□□□□□ -0.71
PHGDH-212ENST00000641247 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
PHGDH-212ENST00000641247 BCKDHBP21953 392 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 GALK1P51570 392 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 CDR1P51861 262 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 FGD1P98174 961 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 ELMOD1Q8N336 334 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 CHCHD4Q8N4Q1 142 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 TTC9BQ8N6N2 239 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 LEMD2Q8NC56 503 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 BEST2Q8NFU1 509 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 DDX12PQ92771 950 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 C18orf25Q96B23 403 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-212ENST00000641247 KIF12Q96FN5 646 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 UROC1Q96N76 676 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
PHGDH-212ENST00000641247 POLR3CQ9BUI4 534 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-212ENST00000641247 AGXT2Q9BYV1 514 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 ATXN3LQ9H3M9 355 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 GKN1Q9NS71 199 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 SLC27A5Q9Y2P5 690 aa10.64□□□□□ -0.71
PHGDH-212ENST00000641247 H7C4K7 107 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 WNT7AO00755 349 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
PHGDH-212ENST00000641247 SOAT2O75908 522 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 RHOBTB1O94844 696 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 RPS6KB1P23443 525 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 TERF1P54274 439 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 OSTNP61366 133 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 CYP4F8P98187 520 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 DUSP4Q13115 394 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 GPR158Q5T848 1215 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 BLOC1S2Q6QNY1 142 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 DNAJB7Q7Z6W7 309 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-212ENST00000641247 NEK8Q86SG6 692 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 BPIFB1Q8TDL5 484 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 NAP1L5Q96NT1 182 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-212ENST00000641247 SLC46A2Q9BY10 475 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 EBF3Q9H4W6 596 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 FSCN3Q9NQT6 498 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 PDRG1Q9NUG6 133 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 TMEM74BQ9NUR3 256 aa10.63□□□□□ -0.71
PHGDH-212ENST00000641247 TIMM13Q9Y5L4 95 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-212ENST00000641247 ATG13O75143 517 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 SPATA31C1P0DKV0 1188 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 GABRR2P28476 465 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 EVCP57679 992 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 SIM1P81133 766 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-212ENST00000641247 SSRP1Q08945 709 aaKnown RBP10.62□□□□□ -0.71
PHGDH-212ENST00000641247 SCAPQ12770 1279 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 RUNX3Q13761 415 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 ELF2Q15723 593 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 MAPK6Q16659 721 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 ITPRIPL2Q3MIP1 535 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 PMS2CLQ68D20 193 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 PIK3AP1Q6ZUJ8 805 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 PIP4P1Q86T03 277 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 FBXL16Q8N461 479 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 FRMD1Q8N878 549 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 ATAD1Q8NBU5 361 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 RPLP0P6Q8NHW5 317 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 ADAM32Q8TC27 787 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 SUSD3Q96L08 255 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 TPSD1Q9BZJ3 242 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 IL21Q9HBE4 155 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 OBP2AQ9NY56 170 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 EBF1Q9UH73 591 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 MBD1Q9UIS9 605 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-212ENST00000641247 CCL26Q9Y258 94 aa10.62□□□□□ -0.71
PHGDH-212ENST00000641247 CCDC194A0A1B0GVG4 234 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 GOLGA6L3A6NEY3 463 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 DPYSL4O14531 572 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 DEXIO95424 95 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 CPB1P15086 417 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 ARSAP15289 507 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 ATP2B1P20020 1258 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 GBP1P32455 592 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 MAPK8P45983 427 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 GRSF1Q12849 480 aaKnown RBP eCLIP10.61□□□□□ -0.71
PHGDH-212ENST00000641247 DMC1Q14565 340 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 ATF7IP2Q5U623 682 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 CENPPQ6IPU0 288 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 ZNF280DQ6N043 979 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 SYT13Q7L8C5 426 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 HAUS6Q7Z4H7 955 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms