RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 GPC2Q8N158 579 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 LRRC71Q8N4P6 559 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PDZD8Q8NEN9 1154 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ACTRT1Q8TDG2 376 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 SCFD1Q8WVM8 642 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TRABDQ9H4I3 376 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 METTL5Q9NRN9 209 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 RAD51CO43502 376 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 EPHX2P34913 555 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TBCCQ15814 346 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 BOLA3Q53S33 107 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PAPD7Q5XG87 772 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 CALML6Q8TD86 181 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 MAF1Q9H063 256 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 WWP1Q9H0M0 922 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TRIM10Q9UDY6 481 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ITGA11Q9UKX5 1188 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 CLGNO14967 610 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ITGB3P05106 788 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 FAM200BP0CF97 657 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 SLC2A3P11169 496 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 SSTR3P32745 418 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 CXCL9Q07325 125 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 APOBEC3HQ6NTF7 200 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 NUDT18Q6ZVK8 323 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TBC1D1Q86TI0 1168 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PPWD1Q96BP3 646 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PDCD2LQ9BRP1 358 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 GTSE1Q9NYZ3 720 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 NAGPAQ9UK23 515 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PCDHB7Q9Y5E2 793 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 VWA5AO00534 786 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 NSUN2Q08J23 767 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 C11orf63Q6NUN7 778 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 LINC00523Q86TU6 105 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 NT5DC4Q86YG4 428 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 DCLK2Q8N568 766 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PARD3BQ8TEW8 1205 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TRIM54Q9BYV2 358 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 L2HGDHQ9H9P8 463 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 FBXO28Q9NVF7 368 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PSD3Q9NYI0 1048 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 NRXN3Q9Y4C0 1643 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 CYP3A7-CYP3A51PA0A087WV96 503 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 HOXA2O43364 376 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 CYP3A7P24462 503 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 KLRC1P26715 233 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TYK2P29597 1187 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ZNF200P98182 395 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ST3GAL1Q11201 340 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 MTA1Q13330 715 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 TRIM51Q9BSJ1 452 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 MTIF3Q9H2K0 278 aaKnown RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 WHRNQ9P202 907 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 RSPH10B2B2RC85 870 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 FBXO21O94952 628 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 MOCS2O96007 188 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-228ENST00000636120 RSPH10BP0C881 870 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 MCF2P10911 925 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 AXLP30530 894 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 KRT33BQ14525 404 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 WDR93Q6P2C0 686 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 C3orf20Q8ND61 904 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 ECT2Q9H8V3 914 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 VTA1Q9NP79 307 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 SCOCQ9UIL1 159 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 L3MBTL1Q9Y468 752 aa6.78□□□□□ -1.32
PDE4D-228ENST00000636120 F8VZ95 297 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 CYP2B6P20813 491 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 BRD2P25440 801 aaKnown RBP6.77□□□□□ -1.33
PDE4D-228ENST00000636120 STIP1P31948 543 aaKnown RBP6.77□□□□□ -1.33
PDE4D-228ENST00000636120 RGS7P49802 495 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 HIBCHQ6NVY1 386 aaPredicted RBP6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SLC13A5Q86YT5 568 aaPredicted RBP6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SPDL1Q96EA4 605 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 THAP2Q9H0W7 228 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 ZC3H7BQ9UGR2 993 aaKnown RBP6.77□□□□□ -1.33
PDE4D-228ENST00000636120 TMEM247A6NEH6 219 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 TOMM70O94826 608 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SGPL1O95470 568 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 CYP11B1P15538 503 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SLC12A3P55017 1021 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 HUNKP57058 714 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 MCL1Q07820 350 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 TAF11Q15544 211 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 OTOP1Q7RTM1 612 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 EXT2Q93063 718 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SERPINB12Q96P63 405 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SPATC1LQ9H0A9 340 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 SIK2Q9H0K1 926 aa6.77□□□□□ -1.33
PDE4D-228ENST00000636120 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms