RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	SYCP2L	Q5T4T6	812 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	SEM1	Q6ZVN7	128 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	HTR3D	Q70Z44	454 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	OVCH2	Q7RTZ1	564 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	C11orf96	Q7Z7L8	435 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	RSPH3	Q86UC2	560 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	FAM83A	Q86UY5	434 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	DENND1C	Q8IV53	801 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	ZNF808	Q8N4W9	903 aa	Predicted RBP	7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	ZBTB34	Q8NCN2	500 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	PPP1R35	Q8TAP8	253 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	ST8SIA2	Q92186	375 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	MPHOSPH6	Q99547	160 aa	Known RBP	7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	MYOC	Q99972	504 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	MRI1	Q9BV20	369 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	SARG	Q9BW04	601 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	FAM30A	Q9NZY2	134 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	DDX20	Q9UHI6	824 aa	Known RBP	7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	MED14	O60244	1454 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	ABCC5	O15440	1437 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	SYNM	O15061	1565 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	NT5C1B-RDH14	C9J2C7	533 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	FTL	P02792	175 aa	Predicted RBP	7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	MAL	P21145	153 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	TGM1	P22735	817 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	PTH1R	Q03431	593 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	SNAPC2	Q13487	334 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	PICALM	Q13492	652 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	GALE	Q14376	348 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	ARHGAP29	Q52LW3	1261 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	THEMIS2	Q5TEJ8	643 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	C3orf20	Q8ND61	904 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	MIEF2	Q96C03	454 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	FAM193B	Q96PV7	902 aa	Predicted RBP	7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	CGRRF1	Q99675	332 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	VRK1	Q99986	396 aa	Predicted RBP	7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	IKZF4	Q9H2S9	585 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	MAN1C1	Q9NR34	630 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891	C1orf112	Q9NSG2	853 aa		7.09	□□□□□ -1.27
NRXN1-223	ENST00000625891		A6NNZ2	444 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	B3GALT2	O43825	422 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	CTNND1	O60716	968 aa	Known RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	MFAP3L	O75121	409 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	TUSC2	O75896	110 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	IPO13	O94829	963 aa	Known RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	UBXN7	O94888	489 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	SNRPA1	P09661	255 aa	Known RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	RAP2A	P10114	183 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	ATP5J	P18859	108 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	GNAT2	P19087	354 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	ACO1	P21399	889 aa	Known RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	IL12RB1	P42701	662 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	CLRN1	P58418	232 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	DGCR2	P98153	550 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	GRM3	Q14832	879 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	LSM12	Q3MHD2	195 aa	Known RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	DRICH1	Q6PGQ1	229 aa	Predicted RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	ANKRD35	Q8N283	1001 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	NDC1	Q9BTX1	674 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	EPC1	Q9H2F5	836 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	KMT5A	Q9NQR1	393 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	POLH	Q9Y253	713 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	RUVBL1	Q9Y265	456 aa	Known RBP	7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	NR2E3	Q9Y5X4	410 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	VPS8	Q8N3P4	1428 aa		7.08	□□□□□ -1.28
NRXN1-223	ENST00000625891	SETD1A	O15047	1707 aa	Known RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	CPS1	P31327	1500 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	NLRP1	Q9C000	1473 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	ANO9	A1A5B4	782 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	KLRG2	A4D1S0	409 aa	Predicted RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	LDHA	P00338	332 aa	Known RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	IFIT2	P09913	472 aa	Known RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	SBK3	P0C264	359 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	MYB	P10242	640 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	MCM7	P33993	719 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	NKX6-1	P78426	367 aa	Predicted RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	NAIF1	Q69YI7	327 aa	Predicted RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	TSHZ1	Q6ZSZ6	1077 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	ZNF575	Q86XF7	245 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	PJA1	Q8NG27	643 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	PLBD2	Q8NHP8	589 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	SLC39A13	Q96H72	371 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	C11orf54	Q9H0W9	315 aa	Predicted RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	RRP7BP	Q9NSQ0	103 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	USP25	Q9UHP3	1055 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	STXBP5L	Q9Y2K9	1186 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	PCDHA3	Q9Y5H8	950 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	PTPN23	Q9H3S7	1636 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	EIF2AK4	Q9P2K8	1649 aa	Known RBP	7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	MYOM3	Q5VTT5	1437 aa		7.07	□□□□□ -1.28
NRXN1-223	ENST00000625891	ARHGAP23	Q9P227	1491 aa		7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891	CAPN14	A8MX76	684 aa		7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891	SLC6A4	P31645	630 aa		7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891	AGFG1	P52594	562 aa	Known RBP	7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891	USP14	P54578	494 aa		7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891	GADL1	Q6ZQY3	521 aa		7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891		Q6ZRM9	215 aa		7.06	□□□□□ -1.28
NRXN1-223	ENST00000625891	CHST15	Q7LFX5	561 aa	Predicted RBP	7.06	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms