RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 OVOS1Q6IE37 1185 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 ZNF280DQ6N043 979 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 USP37Q86T82 979 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 NELFBQ8WX92 580 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 ELMO3Q96BJ8 720 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 HPDLQ96IR7 371 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 TSG101Q99816 390 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 DZANK1Q9NVP4 752 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 WDR27A2RRH5 827 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 SPDYE4A6NLX3 237 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 CETN3O15182 167 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 MAPK13O15264 365 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 CYP11A1P05108 521 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 TRIM49P0CI25 452 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 TRIM49CP0CI26 452 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 VAMP7P51809 220 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 STX17P56962 302 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 SMAD2Q15796 467 aaKnown RBP21.6■■□□□ 1.05
SSBP4-210ENST00000601444 PUS10Q3MIT2 529 aaKnown RBP21.6■■□□□ 1.05
SSBP4-210ENST00000601444 ZC3H3Q8IXZ2 948 aaKnown RBP21.6■■□□□ 1.05
SSBP4-210ENST00000601444 TMC2Q8TDI7 906 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 TMEM209Q96SK2 561 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 DUSP9Q99956 384 aaKnown RBP21.6■■□□□ 1.05
SSBP4-210ENST00000601444 RTP3Q9BQQ7 232 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 ADAM7Q9H2U9 754 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 FBXW11Q9UKB1 542 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 CTNND2Q9UQB3 1225 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 SNX9Q9Y5X1 595 aa21.6■■□□□ 1.05
SSBP4-210ENST00000601444 CDR1P51861 262 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 MYL6P60660 151 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 FKBP3Q00688 224 aaKnown RBP21.59■■□□□ 1.05
SSBP4-210ENST00000601444 LRRC63Q05C16 580 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 TTI2Q6NXR4 508 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 TRIML1Q8N9V2 468 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 ADAMTS19Q8TE59 1207 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 SUSD6Q92537 303 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 PLEKHA4Q9H4M7 779 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 SFXN1Q9H9B4 322 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 GDAP2Q9NXN4 497 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 L1RE1Q9UN81 338 aa21.59■■□□□ 1.05
SSBP4-210ENST00000601444 CCDC195A0A1B0GUA6 201 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 ABLIM3O94929 683 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 VNN1O95497 513 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 C1RP00736 705 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 PPP3CAQ08209 521 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 MYO1EQ12965 1108 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 BIRC3Q13489 604 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 RNF19BQ6ZMZ0 732 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 INTS8Q75QN2 995 aaKnown RBP21.58■■□□□ 1.05
SSBP4-210ENST00000601444 PDCL2Q8N4E4 241 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 OR10T2Q8NGX3 314 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 ZNF461Q8TAF7 563 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 HDAC7Q8WUI4 952 aa21.58■■□□□ 1.05
SSBP4-210ENST00000601444 R3HCC1Q9Y3T6 440 aaKnown RBP21.58■■□□□ 1.05
SSBP4-210ENST00000601444 TCF20Q9UGU0 1960 aaKnown RBP21.57■■□□□ 1.04
SSBP4-210ENST00000601444 PHACTR2O75167 634 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 SEC24AO95486 1093 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 KRT13P13646 458 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 PPP1R2P41236 205 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 GCLMP48507 274 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 ITIH3Q06033 890 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 TRPC3Q13507 836 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 SOWAHAQ2M3V2 549 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 SV2AQ7L0J3 742 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 METTL23Q86XA0 190 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 ZNF707Q96C28 371 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-210ENST00000601444 MKNK1Q9BUB5 465 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 COL25A1Q9BXS0 654 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-210ENST00000601444 XYLT2Q9H1B5 865 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 MMRN2Q9H8L6 949 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 DSEQ9UL01 958 aa21.57■■□□□ 1.04
SSBP4-210ENST00000601444 IKBKBO14920 756 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 HCRTO43612 131 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 HUS1O60921 280 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 ZMYND10O75800 440 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 VNN2O95498 520 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 C8AP07357 584 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 EPB41P11171 864 aaKnown RBP21.56■■□□□ 1.04
SSBP4-210ENST00000601444 CPB1P15086 417 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 AP3M2P53677 418 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 PAK1Q13153 545 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 CBX2Q14781 532 aaPredicted RBP21.56■■□□□ 1.04
SSBP4-210ENST00000601444 ZACNQ401N2 412 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 CES5AQ6NT32 575 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 C15orf39Q6ZRI6 1047 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 GPR149Q86SP6 731 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 OSTM1Q86WC4 334 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 SLC7A14Q8TBB6 771 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 PGLYRP2Q96PD5 576 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 MED15Q96RN5 788 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 DPP7Q9UHL4 492 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 TSC2P49815 1807 aa21.56■■□□□ 1.04
SSBP4-210ENST00000601444 ARHGEF37A1IGU5 675 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 OR6C75A6NL08 312 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 ATF2P15336 505 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 MCCD1P59942 119 aaPredicted RBP21.55■■□□□ 1.04
SSBP4-210ENST00000601444 ADCY1Q08828 1119 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 NCOA4Q13772 614 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 LIMS2Q7Z4I7 341 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 UHRF1Q96T88 793 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms