RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 MAFFQ9ULX9 164 aa27.73■■■□□ 2.03
TRIM28-204ENST00000594806 CDY1Q9Y6F8 540 aa27.73■■■□□ 2.03
TRIM28-204ENST00000594806 TRIM49BA6NDI0 452 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 OR6C75A6NL08 312 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 PHACTR2O75167 634 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 STAU1O95793 577 aaKnown RBP27.72■■■□□ 2.03
TRIM28-204ENST00000594806 C4BPAP04003 597 aaKnown RBP27.72■■■□□ 2.03
TRIM28-204ENST00000594806 ATICP31939 592 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 ITIH3Q06033 890 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 TTI2Q6NXR4 508 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 FILIP1Q7Z7B0 1213 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 PALB2Q86YC2 1186 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 TMEM86AQ8N2M4 240 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.72■■■□□ 2.03
TRIM28-204ENST00000594806 SFXN1Q9H9B4 322 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 METTL14Q9HCE5 456 aaKnown RBP27.72■■■□□ 2.03
TRIM28-204ENST00000594806 DACH1Q9UI36 760 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 PRUNE2Q8WUY3 3088 aa27.72■■■□□ 2.03
TRIM28-204ENST00000594806 STX10O60499 249 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 HUS1O60921 280 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 FGFR1OPO95684 399 aaKnown RBP27.71■■■□□ 2.03
TRIM28-204ENST00000594806 PTMSP20962 102 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 GTF2H1P32780 548 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 DLG4P78352 724 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 BIRC3Q13489 604 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 ZACNQ401N2 412 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 TJAP1Q5JTD0 557 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 TPGS2Q68CL5 300 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 SYCE2Q6PIF2 218 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 RBM43Q6ZSC3 357 aaKnown RBP27.71■■■□□ 2.03
TRIM28-204ENST00000594806 GLYCTKQ8IVS8 523 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 TOP6BLQ8N6T0 577 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 ZNF461Q8TAF7 563 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 SYAP1Q96A49 352 aaPredicted RBP27.71■■■□□ 2.03
TRIM28-204ENST00000594806 MAN1C1Q9NR34 630 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 CTNND2Q9UQB3 1225 aa27.71■■■□□ 2.03
TRIM28-204ENST00000594806 TIMM13Q9Y5L4 95 aaPredicted RBP27.71■■■□□ 2.03
TRIM28-204ENST00000594806 FAM163BP0C2L3 166 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 CT47A1Q5JQC4 288 aaPredicted RBP27.7■■■□□ 2.02
TRIM28-204ENST00000594806 PTCRAQ6ISU1 281 aaPredicted RBP27.7■■■□□ 2.02
TRIM28-204ENST00000594806 CYP26C1Q6V0L0 522 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 THEM5Q8N1Q8 247 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 KREMEN2Q8NCW0 462 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 CMASQ8NFW8 434 aaPredicted RBP27.7■■■□□ 2.02
TRIM28-204ENST00000594806 FAM84AQ96KN4 292 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 DUSP9Q99956 384 aaKnown RBP27.7■■■□□ 2.02
TRIM28-204ENST00000594806 S1PR5Q9H228 398 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 VRTNQ9H8Y1 702 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 RWDD2AQ9UIY3 292 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 FBXW11Q9UKB1 542 aa27.7■■■□□ 2.02
TRIM28-204ENST00000594806 GRXCR2A6NFK2 248 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 SPDYE4A6NLX3 237 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 ADAM12O43184 909 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 MBTPS2O43462 519 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 ABLIM3O94929 683 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 GNA14O95837 355 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 CST3P01034 146 aaPredicted RBP27.69■■■□□ 2.02
TRIM28-204ENST00000594806 NLRP12P59046 1061 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 ROR1Q01973 937 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 UVSSAQ2YD98 709 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 C1orf220Q5T0J3 134 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 TDRD10Q5VZ19 366 aaKnown RBP27.69■■■□□ 2.02
TRIM28-204ENST00000594806 CES5AQ6NT32 575 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 RSPO2Q6UXX9 243 aaPredicted RBP27.69■■■□□ 2.02
TRIM28-204ENST00000594806 SV2AQ7L0J3 742 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 RHOBTB2Q9BYZ6 727 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 ADAM7Q9H2U9 754 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 SNX9Q9Y5X1 595 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 TSC2P49815 1807 aa27.69■■■□□ 2.02
TRIM28-204ENST00000594806 PAPLNO95428 1278 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 WSCD1Q658N2 575 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 C15orf39Q6ZRI6 1047 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 FRMD5Q7Z6J6 570 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 TAF4BQ92750 862 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 EEF2KMTQ96G04 330 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 ZDHHC7Q9NXF8 308 aa27.68■■■□□ 2.02
TRIM28-204ENST00000594806 ARMCX3Q9UH62 379 aaPredicted RBP27.68■■■□□ 2.02
TRIM28-204ENST00000594806 BMP1P13497 986 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 NCOA4Q13772 614 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 SGSM1Q2NKQ1 1148 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 CCDC183Q5T5S1 534 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 LIN9Q5TKA1 542 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 CCDC149Q6ZUS6 474 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 TMEM8AQ9HCN3 771 aa27.67■■■□□ 2.02
TRIM28-204ENST00000594806 WDR27A2RRH5 827 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 ATF2P15336 505 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 HOXA9P31269 272 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 LHX1P48742 406 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 KCNQ1P51787 676 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 MYL6P60660 151 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 SMAD2Q15796 467 aaKnown RBP27.66■■■□□ 2.02
TRIM28-204ENST00000594806 CLUL1Q15846 466 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 SCARA3Q6AZY7 606 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 LIMS2Q7Z4I7 341 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 PDCL2Q8N4E4 241 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 SUSD6Q92537 303 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 NECTIN4Q96NY8 510 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 XYLT2Q9H1B5 865 aa27.66■■■□□ 2.02
TRIM28-204ENST00000594806 AFF4Q9UHB7 1163 aaKnown RBP27.66■■■□□ 2.02
TRIM28-204ENST00000594806 ZMYND10O75800 440 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms