RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 AGAP11Q8TF27 550 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 CASP10Q92851 521 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 SKA1Q96BD8 255 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 HAUS1Q96CS2 278 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 CYFIP2Q96F07 1278 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 NEK1Q96PY6 1258 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 HAPLN3Q96S86 360 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 RHOXF2Q9BQY4 288 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 XPO4Q9C0E2 1151 aaKnown RBP6.56□□□□□ -1.36
SMAD4-203ENST00000585448 DRC3Q9H069 523 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 ZCWPW1Q9H0M4 648 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 SMOC1Q9H4F8 434 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 SLC52A2Q9HAB3 445 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 PARVGQ9HBI0 331 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 RHBDL2Q9NX52 303 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 IL20Q9NYY1 176 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 IL1RAPL1Q9NZN1 696 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 SAP30BPQ9UHR5 308 aaKnown RBP6.56□□□□□ -1.36
SMAD4-203ENST00000585448 LIMCH1Q9UPQ0 1083 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 SMG5Q9UPR3 1016 aaKnown RBP6.56□□□□□ -1.36
SMAD4-203ENST00000585448 LUC7L2Q9Y383 392 aaKnown RBP6.56□□□□□ -1.36
SMAD4-203ENST00000585448 TRAF6Q9Y4K3 522 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
SMAD4-203ENST00000585448 KDM6AO15550 1401 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-203ENST00000585448 ARHGEF11O15085 1522 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 IFT140Q96RY7 1462 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 CFAP69A5D8W1 941 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 DBX1A6NMT0 343 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ENPP3O14638 875 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 IKBKBO14920 756 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 HIP1RO75146 1068 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 FGFR1OPO95684 399 aaKnown RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ASGR2P07307 311 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 HSPA1AP0DMV8 641 aaKnown RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 HSPA1BP0DMV9 641 aaKnown RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ENPP1P22413 925 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ATP8B2P98198 1209 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 PLOD1Q02809 727 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 SPIRE1Q08AE8 756 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 MAP3K12Q12852 859 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 PDCLQ13371 301 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 KCNA10Q16322 511 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 COBLL1Q53SF7 1204 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 GKAP1Q5VSY0 366 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 STEAP3Q658P3 488 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 KAZNQ674X7 775 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 NXNQ6DKJ4 435 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 OR52E8Q6IFG1 317 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 EMBQ6PCB8 327 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 CCNI2Q6ZMN8 369 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ZNF804AQ7Z570 1209 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 RAB11FIP4Q86YS3 637 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 LSMEM2Q8N112 164 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 TMEM57Q8N5G2 664 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ESX1Q8N693 406 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ATP8B4Q8TF62 1192 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ATRIPQ8WXE1 791 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 CCT6BQ92526 530 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ALG3Q92685 438 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 IFT74Q96LB3 600 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 OLFM3Q96PB7 478 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 NAPGQ99747 312 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 SELENOOQ9BVL4 669 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 DHX36Q9H2U1 1008 aaKnown RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 AS3MTQ9HBK9 375 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 TRIM39Q9HCM9 518 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 ATP8A2Q9NTI2 1148 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 IFNKQ9P0W0 207 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 PPARGC1AQ9UBK2 798 aaKnown RBP6.55□□□□□ -1.36
SMAD4-203ENST00000585448 GTF3C4Q9UKN8 822 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 CFAP45Q9UL16 551 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 MTUS1Q9ULD2 1270 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 TIMM22Q9Y584 194 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 NR2E3Q9Y5X4 410 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 C9orf84Q5VXU9 1444 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 UGGT2Q9NYU1 1516 aa6.55□□□□□ -1.36
SMAD4-203ENST00000585448 KDM6BO15054 1643 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 ADGRL1O94910 1474 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 IQSEC2Q5JU85 1478 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 IQGAP2Q13576 1575 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 NOS1P29475 1434 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-203ENST00000585448 DYTNA2CJ06 578 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 VPS37CA5D8V6 355 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-203ENST00000585448 MAGEA13PA6NCF6 341 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 PABPN1LA6NDY0 278 aaKnown RBP6.54□□□□□ -1.36
SMAD4-203ENST00000585448 CCT8L1PA6NM43 557 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 CETN3O15182 167 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 STRNO43815 780 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 PEX14O75381 377 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 TACC1O75410 805 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 ASLP04424 464 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 SDSP20132 328 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 PMLP29590 882 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 PRKAR2BP31323 418 aa6.54□□□□□ -1.36
SMAD4-203ENST00000585448 ZNF131P52739 623 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms