RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ZBTB21Q9ULJ3 1066 aa7.15□□□□□ -1.26
HERPUD1-208ENST00000563911 GOLGA6CA6NDK9 693 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 GOLGA6BA6NDN3 693 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 TCAF2A6NFQ2 919 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 DDX3XO00571 662 aaKnown RBP eCLIP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 PRPF3O43395 683 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 ZRANB2O95218 330 aaKnown RBP eCLIP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 GOLGA6DP0CG33 693 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 COL6A1P12109 1028 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 PSMC4P43686 418 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 KCNQ1P51787 676 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 NRG3P56975 720 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 PRKCZQ05513 592 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 CCDC178Q5BJE1 867 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 ECM29Q5VYK3 1845 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 NXNQ6DKJ4 435 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 CUL9Q8IWT3 2517 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 DIS3LQ8TF46 1054 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 U2AF1L4Q8WU68 220 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 ZCCHC14Q8WYQ9 949 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 FATE1Q969F0 183 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 ALPK3Q96L96 1907 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 GDF15Q99988 308 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 PLA2G12BQ9BX93 195 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 CSRNP2Q9H175 543 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 PNNQ9H307 717 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 EPB41L4AQ9HCS5 686 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 GEMIN8Q9NWZ8 242 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 MTMR10Q9NXD2 777 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 GOLGA6AQ9NYA3 693 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 RIPOR2Q9Y4F9 1068 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 KCTD3Q9Y597 815 aa7.14□□□□□ -1.27
HERPUD1-208ENST00000563911 FAM205AQ6ZU69 1335 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 SGPL1O95470 568 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 GYG1P46976 350 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 RBM5P52756 815 aaKnown RBP eCLIP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 FKBP1AP62942 108 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 LMOD3Q0VAK6 560 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 GCKRQ14397 625 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 ANO4Q32M45 955 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 TMEM200BQ69YZ2 307 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 CXorf57Q6NSI4 855 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 LMBR1LQ6UX01 489 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 MAGEB6Q8N7X4 407 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 TDRD7Q8NHU6 1098 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 TTC8Q8TAM2 541 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 FAM84BQ96KN1 310 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 LRGUKQ96M69 825 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 NUP88Q99567 741 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 SLC38A3Q99624 504 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 ANKRD2Q9GZV1 360 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 POLR3BQ9NW08 1133 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 DNAI1Q9UI46 699 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 TUBD1Q9UJT1 453 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 A0A1B0GUL6 1792 aa7.13□□□□□ -1.27
HERPUD1-208ENST00000563911 LAMA2P24043 3122 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 A0A0A6YYK5 440 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 RFXAPO00287 272 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 ZNF28P17035 718 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 IGHMBP2P38935 993 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 STAT5BP51692 787 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 ADKP55263 362 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 MGAT5Q09328 741 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 ADRM1Q16186 407 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 UAP1L1Q3KQV9 507 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 RRP12Q5JTH9 1297 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 MIGA2Q7L4E1 593 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 GLB1L2Q8IW92 636 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 DEFB123Q8N688 67 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 NUDT10Q8NFP7 164 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 CLIP3Q96DZ5 547 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 NUDT11Q96G61 164 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 WDR92Q96MX6 357 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 PPP1R16BQ96T49 567 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 SOX7Q9BT81 388 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 PUS3Q9BZE2 481 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 HAPLN2Q9GZV7 340 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 NTMQ9P121 344 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 ZMYND8Q9ULU4 1186 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
HERPUD1-208ENST00000563911 PDHXO00330 501 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 APAF1O14727 1248 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 PLIN1O60240 522 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 KLHL18O94889 574 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 HMGCRP04035 888 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 C1QTNF9P0C862 333 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 CETPP11597 493 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 SYN1P17600 705 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 SLC16A1P53985 500 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 MALLQ13021 153 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 PPIL2Q13356 520 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 GTF2H3Q13889 308 aa7.11□□□□□ -1.27
HERPUD1-208ENST00000563911 EIF4HQ15056 248 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms