RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 GLIS3Q8NEA6 775 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 GPT2Q8TD30 523 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 MSTO1Q9BUK6 570 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 WNT16Q9UBV4 365 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 CDH7Q9ULB5 785 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
USB1-208ENST00000563207 STK25O00506 426 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 OGTO15294 1046 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 FAM189A1O60320 539 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 LRRN2O75325 713 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 LDHAP00338 332 aaKnown RBP16.96■□□□□ 0.31
USB1-208ENST00000563207 SRFP11831 508 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 MRPL58Q14197 206 aaKnown RBP16.96■□□□□ 0.31
USB1-208ENST00000563207 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 ANKS3Q6ZW76 656 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 ASCL5Q7RTU5 278 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 TMEM174Q8WUU8 243 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 POMGNT1Q8WZA1 660 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 KXD1Q9BQD3 176 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 SLC38A7Q9NVC3 462 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.31
USB1-208ENST00000563207 TTC26A0AVF1 554 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 LACTBL1A8MY62 500 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 ANKRD63C9JTQ0 380 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 PDXKO00764 312 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 PPEF2O14830 753 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 TRAPPC3O43617 180 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 ABLIM3O94929 683 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 CLTAP09496 248 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 HOXA9P31269 272 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 HOXD13P35453 343 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 CDR1P51861 262 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 CAMK4Q16566 473 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 SLC8B1Q6J4K2 584 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 NPAS3Q8IXF0 933 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 ZNF461Q8TAF7 563 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 TCEAL4Q96EI5 215 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 MCRS1Q96EZ8 462 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 SUSD3Q96L08 255 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 TSPAN18Q96SJ8 248 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 PLA2G2FQ9BZM2 168 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 FOXQ1Q9C009 403 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 TBC1D17Q9HA65 648 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 AGO2Q9UKV8 859 aaKnown RBP16.95■□□□□ 0.3
USB1-208ENST00000563207 NUB1Q9Y5A7 615 aa16.95■□□□□ 0.3
USB1-208ENST00000563207 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
USB1-208ENST00000563207 TGFB1I1O43294 461 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 GFRA3O60609 400 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 DCNP07585 359 aaKnown RBP16.94■□□□□ 0.3
USB1-208ENST00000563207 RHOP08100 348 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 OR4Q2P0C623 313 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 CEBPBP17676 345 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 ADSSP30520 456 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 RPL9P32969 192 aaKnown RBP16.94■□□□□ 0.3
USB1-208ENST00000563207 STIM1Q13586 685 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 MYBPC2Q14324 1141 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 ZBTB6Q15916 424 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 ENOX2Q16206 610 aaKnown RBP16.94■□□□□ 0.3
USB1-208ENST00000563207 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 PABPC1LQ4VXU2 614 aaKnown RBP16.94■□□□□ 0.3
USB1-208ENST00000563207 ARMCX5Q6P1M9 558 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 FRMD5Q7Z6J6 570 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 CCDC105Q8IYK2 499 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 DTWD2Q8NBA8 298 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 ERCC4Q92889 916 aaPredicted RBP16.94■□□□□ 0.3
USB1-208ENST00000563207 KIAA1586Q9HCI6 787 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 MAN1B1Q9UKM7 699 aa16.94■□□□□ 0.3
USB1-208ENST00000563207 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.94■□□□□ 0.3
USB1-208ENST00000563207 CACNA1HO95180 2353 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 CALUO43852 315 aaPredicted RBP16.93■□□□□ 0.3
USB1-208ENST00000563207 XYLBO75191 536 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 VNN2O95498 520 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 GLULP15104 373 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 CCR2P41597 374 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 NUBP1P53384 320 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 MORC3Q14149 939 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 CTXN3Q4LDR2 81 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 RNF19BQ6ZMZ0 732 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 SLC9A9Q8IVB4 645 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 CD302Q8IX05 232 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 NELFCDQ8IXH7 590 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 HS6ST3Q8IZP7 471 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 NXPE3Q969Y0 559 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 KIF12Q96FN5 646 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 KCTD10Q9H3F6 313 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 CYP4F11Q9HBI6 524 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 ARHGEF3Q9NR81 526 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 AGPAT3Q9NRZ7 376 aa16.93■□□□□ 0.3
USB1-208ENST00000563207 CPSF3Q9UKF6 684 aaKnown RBP16.93■□□□□ 0.3
USB1-208ENST00000563207 MTF2Q9Y483 593 aaPredicted RBP16.93■□□□□ 0.3
USB1-208ENST00000563207 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 PRRG1O14668 218 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 SYN3O14994 580 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 ATF2P15336 505 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 GJA1P17302 382 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 CD72P21854 359 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms