RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZNF606Q8WXB4 792 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 ZNF653Q96CK0 615 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 ZNF560Q96MR9 790 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 OSBPL9Q96SU4 736 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 APOL6Q9BWW8 343 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.7□□□□□ -0.06
TPM1-215ENST00000558868 ERVK-5Q9HDB9 667 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 ACP6Q9NPH0 428 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 AVENQ9NQS1 362 aaPredicted RBP14.7□□□□□ -0.06
TPM1-215ENST00000558868 AMFRQ9UKV5 643 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 KIAA1257Q9ULG3 409 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 POLIQ9UNA4 740 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 PHF24Q9UPV7 400 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 PTCH2Q9Y6C5 1203 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 ITGA4P13612 1032 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 AKAP5P24588 427 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 PAFAH1B1P43034 410 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 PAK2Q13177 524 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 FBXO47Q5MNV8 452 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 C11orf63Q6NUN7 778 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 FAM43BQ6ZT52 329 aaPredicted RBP14.69□□□□□ -0.06
TPM1-215ENST00000558868 MCOLN2Q8IZK6 566 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 SLC43A3Q8NBI5 491 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 TMEM35BQ8NCS4 154 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 SMG8Q8ND04 991 aaKnown RBP14.69□□□□□ -0.06
TPM1-215ENST00000558868 WNT8BQ93098 351 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 PBKQ96KB5 322 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 TRAIPQ9BWF2 469 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 TLR10Q9BXR5 811 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 STARD7Q9NQZ5 370 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 SLC38A7Q9NVC3 462 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 PCDHGC3Q9UN70 934 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 HES2Q9Y543 173 aa14.69□□□□□ -0.06
TPM1-215ENST00000558868 CUL9Q8IWT3 2517 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 MYH10P35580 1976 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 A0A1W2PQ45 241 aaPredicted RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 A0A1W2PQY0 241 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 FTCDO95954 541 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 TRIM71Q2Q1W2 868 aaKnown RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 CCDC181Q5TID7 509 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 NAA35Q5VZE5 725 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 SCARA3Q6AZY7 606 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 DNAAF5Q86Y56 855 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 PHF13Q86YI8 300 aaPredicted RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 ARHGEF26Q96DR7 871 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 ZMAT2Q96NC0 199 aaKnown RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 SELENOOQ9BVL4 669 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 MRPL47Q9HD33 250 aaKnown RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 FAM105AQ9NUU6 356 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 LCMT1Q9UIC8 334 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 BARX2Q9UMQ3 279 aaPredicted RBP14.68□□□□□ -0.06
TPM1-215ENST00000558868 GIT1Q9Y2X7 761 aa14.68□□□□□ -0.06
TPM1-215ENST00000558868 ARVCFO00192 962 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 BUB1BO60566 1050 aaPredicted RBP14.67□□□□□ -0.06
TPM1-215ENST00000558868 ZNF623O75123 536 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 CILPO75339 1184 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 KIF4AO95239 1232 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 CALB1P05937 261 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 VDRP11473 427 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 CD19P15391 556 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 GUCY2FP51841 1108 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 NOMO3P69849 1222 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 ITIH3Q06033 890 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 INCA1Q0VD86 236 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 STILQ15468 1287 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 SV2CQ496J9 727 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 CFAP221Q4G0U5 840 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 C9orf57Q5W0N0 161 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 RSRC2Q7L4I2 434 aaKnown RBP14.67□□□□□ -0.06
TPM1-215ENST00000558868 MRPL10Q7Z7H8 261 aaKnown RBP14.67□□□□□ -0.06
TPM1-215ENST00000558868 MSANTD4Q8NCY6 345 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 RABGGTAQ92696 567 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 PGBD4Q96DM1 585 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 CYFIP2Q96F07 1278 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 TMEM176AQ96HP8 235 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 RPS6KC1Q96S38 1066 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 NUP85Q9BW27 656 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 LHX5Q9H2C1 402 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 SMYD3Q9H7B4 428 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 OSGEPQ9NPF4 335 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 UBN1Q9NPG3 1134 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 TRMT13Q9NUP7 481 aaKnown RBP14.67□□□□□ -0.06
TPM1-215ENST00000558868 ADAM22Q9P0K1 906 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 TUBGCP4Q9UGJ1 667 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 PADI3Q9ULW8 664 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 PTPN22Q9Y2R2 807 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 SZT2Q5T011 3432 aa14.67□□□□□ -0.06
TPM1-215ENST00000558868 MIF4GDA9UHW6 222 aaKnown RBP14.66□□□□□ -0.06
TPM1-215ENST00000558868 DNM1LO00429 736 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 PIRO00625 290 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 NCK2O43639 380 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 SRGAP2O75044 1071 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 FAM163BP0C2L3 166 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 GHRP10912 638 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms