RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 GTF3C4Q9UKN8 822 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 AGAP1Q9UPQ3 857 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 TDRD15B5MCY1 1934 aaKnown RBP11.62□□□□□ -0.55
PABPN1-203ENST00000553960 TET1Q8NFU7 2136 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 CES2O00748 559 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 MED7O43513 233 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 NBNO60934 754 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 CYP1A2P05177 515 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 CTSHP09668 335 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 SETSIPP0DME0 302 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 TNNT1P13805 278 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 WARSP23381 471 aaKnown RBP11.62□□□□□ -0.55
PABPN1-203ENST00000553960 RPL34P49207 117 aaKnown RBP11.62□□□□□ -0.55
PABPN1-203ENST00000553960 TAF6P49848 677 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 RAD23BP54727 409 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 LILRA4P59901 499 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 TUBB4BP68371 445 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
PABPN1-203ENST00000553960 TUSC3Q13454 348 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 CLEC16AQ2KHT3 1053 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 CCDC122Q5T0U0 273 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 PAPD7Q5XG87 772 aaKnown RBP11.62□□□□□ -0.55
PABPN1-203ENST00000553960 ARHGAP17Q68EM7 881 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 ACAD10Q6JQN1 1059 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 GLYCTKQ8IVS8 523 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 RBBP8NLQ8NC74 664 aaPredicted RBP11.62□□□□□ -0.55
PABPN1-203ENST00000553960 ZNF606Q8WXB4 792 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 RFFLQ8WZ73 363 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 ARID3AQ99856 593 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 UVRAGQ9P2Y5 699 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 HES2Q9Y543 173 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 MICAL3Q7RTP6 2002 aa11.62□□□□□ -0.55
PABPN1-203ENST00000553960 M0QZQ0 153 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 ENPP3O14638 875 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 TFRCP02786 760 aaKnown RBP11.61□□□□□ -0.55
PABPN1-203ENST00000553960 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
PABPN1-203ENST00000553960 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
PABPN1-203ENST00000553960 VDRP11473 427 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 GABRB2P47870 512 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 LBX1P52954 281 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 CYP27A1Q02318 531 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 TLE2Q04725 743 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 UPP1Q16831 310 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 SPOPLQ6IQ16 392 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 TMEM270Q6UE05 265 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 LCLAT1Q6UWP7 414 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 NECAB2Q7Z6G3 386 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 KIAA1328Q86T90 577 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 GPR65Q8IYL9 337 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 SLC4A11Q8NBS3 891 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 PPP1R13LQ8WUF5 828 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 NOX5Q96PH1 765 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 OSBPL7Q9BZF2 842 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 HIPK3Q9H422 1215 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
PABPN1-203ENST00000553960 JRKLQ9Y4A0 524 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 PCDHB4Q9Y5E5 795 aa11.61□□□□□ -0.55
PABPN1-203ENST00000553960 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 ABHD14A-ACY1A0A1B0GW23 586 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 TYMPP19971 482 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 MMP8P22894 467 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 AKAP5P24588 427 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 GNA15P30679 374 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 SCNN1AP37088 669 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 GALCP54803 685 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 TNNC1P63316 161 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 NOMO3P69849 1222 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 ITIH3Q06033 890 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 SOX4Q06945 474 aaPredicted RBP11.6□□□□□ -0.55
PABPN1-203ENST00000553960 SOWAHAQ2M3V2 549 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 DCLRE1AQ6PJP8 1040 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 ARCQ7LC44 396 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 C17orf53Q8N3J3 647 aaPredicted RBP11.6□□□□□ -0.55
PABPN1-203ENST00000553960 LRRC57Q8N9N7 239 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 SECISBP2LQ93073 1101 aaKnown RBP11.6□□□□□ -0.55
PABPN1-203ENST00000553960 VWCEQ96DN2 955 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 TMEM176AQ96HP8 235 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 RPS6KC1Q96S38 1066 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 GAD1Q99259 594 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 OXCT2Q9BYC2 517 aaPredicted RBP11.6□□□□□ -0.55
PABPN1-203ENST00000553960 MIS12Q9H081 205 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 SDCBP2Q9H190 292 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 C11orf49Q9H6J7 331 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 RNF14Q9UBS8 474 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 TUBGCP4Q9UGJ1 667 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 PARP2Q9UGN5 583 aa11.6□□□□□ -0.55
PABPN1-203ENST00000553960 DSEQ9UL01 958 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms