RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 ADAT2Q7Z6V5 191 aaKnown RBP23.15■■□□□ 1.3
RITA1-202ENST00000549621 C1orf131Q8NDD1 294 aaKnown RBP23.15■■□□□ 1.3
RITA1-202ENST00000549621 ZIC5Q96T25 663 aa23.15■■□□□ 1.3
RITA1-202ENST00000549621 PCDHGC3Q9UN70 934 aa23.15■■□□□ 1.3
RITA1-202ENST00000549621 TRIP12Q14669 1992 aaPredicted RBP23.14■■□□□ 1.29
RITA1-202ENST00000549621 PYGMP11217 842 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 CDH8P55286 799 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 PAK2Q13177 524 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 MAMLD1Q13495 774 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 TRADDQ15628 312 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 SEL1L2Q5TEA6 688 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 EMBQ6PCB8 327 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 DNAJB3Q8WWF6 145 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 AMACRQ9UHK6 382 aa23.14■■□□□ 1.29
RITA1-202ENST00000549621 TREHO43280 583 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 CDH5P33151 784 aaPredicted RBP23.13■■□□□ 1.29
RITA1-202ENST00000549621 ZNF200P98182 395 aaPredicted RBP23.13■■□□□ 1.29
RITA1-202ENST00000549621 TRPV1Q8NER1 839 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 CAVIN3Q969G5 261 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 EIF2AQ9BY44 585 aaKnown RBP23.13■■□□□ 1.29
RITA1-202ENST00000549621 ITGA11Q9UKX5 1188 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 NFU1Q9UMS0 254 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 PROSCO94903 275 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 RAD23BP54727 409 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 FSCN1Q16658 493 aaKnown RBP23.13■■□□□ 1.29
RITA1-202ENST00000549621 SLC27A1Q6PCB7 646 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 NT5DC4Q86YG4 428 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 IFT81Q8WYA0 676 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 CXCL16Q9H2A7 254 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 AGAP1Q9UPQ3 857 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 SCINQ9Y6U3 715 aa23.13■■□□□ 1.29
RITA1-202ENST00000549621 GOLGA6L10A0A0M3HER8 536 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 MYO1FO00160 1098 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 RWDD2BP57060 319 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 WDTC1Q8N5D0 677 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 TMEM35BQ8NCS4 154 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 WHAMMQ8TF30 809 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 TMEM40Q8WWA1 233 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 CCDC102AQ96A19 550 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 ZBTB9Q96C00 473 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 KIF12Q96FN5 646 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 HPDLQ96IR7 371 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 MRPL47Q9HD33 250 aaKnown RBP23.12■■□□□ 1.29
RITA1-202ENST00000549621 DPP3Q9NY33 737 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 HMGXB4Q9UGU5 601 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 TRIP11Q15643 1979 aa23.12■■□□□ 1.29
RITA1-202ENST00000549621 TTI1O43156 1089 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 GJB6O95452 261 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 AKR1A1P14550 325 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 HOXC8P31273 242 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 SLC1A1P43005 524 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 LACTBP83111 547 aaPredicted RBP23.11■■□□□ 1.29
RITA1-202ENST00000549621 PURAQ00577 322 aaKnown RBP23.11■■□□□ 1.29
RITA1-202ENST00000549621 CD302Q8IX05 232 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 ZDHHC14Q8IZN3 488 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 SNX27Q96L92 541 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 TWNKQ96RR1 684 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 KATNAL1Q9BW62 490 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 CELF4Q9BZC1 486 aaKnown RBP23.11■■□□□ 1.29
RITA1-202ENST00000549621 ZNF518BQ9C0D4 1074 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 ACBD3Q9H3P7 528 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 SNTG2Q9NY99 539 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 TCRBV5S1A1TA0A578 114 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 MYADML2A6NDP7 307 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 PAEPP09466 180 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 HSPA6P17066 643 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 TM4SF4P48230 202 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 NNTQ13423 1086 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 PCBP1Q15365 356 aaKnown RBP eCLIP23.11■■□□□ 1.29
RITA1-202ENST00000549621 DENND1BQ6P3S1 775 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 NOTUMQ6P988 496 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 APBB1IPQ7Z5R6 666 aaPredicted RBP23.11■■□□□ 1.29
RITA1-202ENST00000549621 CCDC26Q8TAB7 109 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 ELOVL4Q9GZR5 314 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 CYP3A43Q9HB55 503 aa23.11■■□□□ 1.29
RITA1-202ENST00000549621 CA12O43570 354 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 CILPO75339 1184 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 STAU1O95793 577 aaKnown RBP23.1■■□□□ 1.29
RITA1-202ENST00000549621 CALB1P05937 261 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 FAM153BP0C7A2 387 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 EIF4BP23588 611 aaKnown RBP23.1■■□□□ 1.29
RITA1-202ENST00000549621 AARSP49588 968 aaKnown RBP eCLIP23.1■■□□□ 1.29
RITA1-202ENST00000549621 RBP5P82980 135 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 GPS2Q13227 327 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 ORC1Q13415 861 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 SNX17Q15036 470 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 PPP2R5EQ16537 467 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 FAM153CQ494X1 144 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 MAATS1Q7Z4T9 603 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 SLC13A5Q86YT5 568 aaPredicted RBP23.1■■□□□ 1.29
RITA1-202ENST00000549621 SLC4A11Q8NBS3 891 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 ARHGAP39Q9C0H5 1083 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 PLEKHA5Q9HAU0 1116 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 PARVAQ9NVD7 372 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 FAM153AQ9UHL3 310 aa23.1■■□□□ 1.29
RITA1-202ENST00000549621 TCRBV7S2A1N4TA0A589 114 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 C17orf102A2RUQ5 167 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 CD19P15391 556 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 ECHS1P30084 290 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 KCTD19Q17RG1 926 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms