RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 TRPV5Q9NQA5 729 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 TBX20Q9UMR3 447 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CHURC1-FNTBB4DL54 471 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 SYN3O14994 580 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 MICAL2O94851 1124 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 SEC24AO95486 1093 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 BMP15O95972 392 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 PIGRP01833 764 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CLTAP09496 248 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 ATF2P15336 505 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CCNE1P24864 410 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 FNTBP49356 437 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 ARPP19P56211 112 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 DMWDQ09019 674 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 SRSF5Q13243 272 aaKnown RBP12.91□□□□□ -0.34
GABPB1-206ENST00000543881 PDZD4Q76G19 769 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-206ENST00000543881 DDX1Q92499 740 aaKnown RBP12.91□□□□□ -0.34
GABPB1-206ENST00000543881 BICD1Q96G01 975 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 ZSWIM3Q96MP5 696 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CCSER1Q9C0I3 900 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CYP4F11Q9HBI6 524 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 H0YCG3 227 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 K7ENM7 598 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 ZNF263O14978 683 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 TRAK2O60296 914 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 FAM13AO94988 1023 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-206ENST00000543881 NMT1P30419 496 aaKnown RBP12.9□□□□□ -0.34
GABPB1-206ENST00000543881 LRPAP1P30533 357 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 MCM4P33991 863 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 CNR2P34972 360 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 VIPR2P41587 438 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
GABPB1-206ENST00000543881 LIG4P49917 911 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 RESTQ13127 1097 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 GAS6Q14393 721 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
GABPB1-206ENST00000543881 CYP4A22Q5TCH4 519 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 TCEAL8Q8IYN2 117 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 SPEM1Q8N4L4 309 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 DEPDC1BQ8WUY9 529 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.34
GABPB1-206ENST00000543881 DDX12PQ92771 950 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 PARVGQ9HBI0 331 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 FBXO2Q9UK22 296 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-206ENST00000543881 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 INSL5Q9Y5Q6 135 aa12.9□□□□□ -0.34
GABPB1-206ENST00000543881 CACNA1GO43497 2377 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 A0A0B4J269 797 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 TISP43B9A030 160 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
GABPB1-206ENST00000543881 OGTO15294 1046 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 FOXD2O60548 495 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-206ENST00000543881 ADRB2P07550 413 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 SYT1P21579 422 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 DDIT3P35638 169 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 CTXN3Q4LDR2 81 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-206ENST00000543881 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
GABPB1-206ENST00000543881 IL31Q6EBC2 164 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 IKZF4Q9H2S9 585 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 ZHX3Q9H4I2 956 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 RBM12Q9NTZ6 932 aaKnown RBP12.89□□□□□ -0.35
GABPB1-206ENST00000543881 PCDHB8Q9UN66 801 aa12.89□□□□□ -0.35
GABPB1-206ENST00000543881 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 H7C4K7 107 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 K7ESF4 209 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 M0QZQ0 153 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 PPEF2O14830 753 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 KRT18P05783 430 aaKnown RBP12.88□□□□□ -0.35
GABPB1-206ENST00000543881 GJA1P17302 382 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 GTF2BQ00403 316 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 LRRC32Q14392 662 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 MFSD6LQ8IWD5 586 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 ELMOD1Q8N336 334 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 RASSF8Q8NHQ8 419 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-206ENST00000543881 ZNF512Q96ME7 567 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-206ENST00000543881 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
GABPB1-206ENST00000543881 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
GABPB1-206ENST00000543881 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-206ENST00000543881 NCANO14594 1321 aa12.88□□□□□ -0.35
GABPB1-206ENST00000543881 CHD6Q8TD26 2715 aa12.87□□□□□ -0.35
GABPB1-206ENST00000543881 ARNTLO00327 626 aa12.87□□□□□ -0.35
GABPB1-206ENST00000543881 TBCAO75347 108 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms