RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PPM1AP35813 382 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CASRP41180 1078 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 DPP6P42658 865 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 BTDP43251 543 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PXNP49023 591 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ETF1P62495 437 aaKnown RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 RNASELQ05823 741 aaKnown RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 GFPT1Q06210 699 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 KLRC3Q07444 240 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF211Q13398 564 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 GRM2Q14416 872 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 SHROOM1Q2M3G4 852 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 TAF7LQ5H9L4 462 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 DGKKQ5KSL6 1271 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 FYB2Q5VWT5 728 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 INO80CQ6PI98 192 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATF7IPQ6VMQ6 1270 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 EEPD1Q7L9B9 569 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 TIPARPQ7Z3E1 657 aaKnown RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 NAXDQ8IW45 347 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 DHX37Q8IY37 1157 aaKnown RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CAMKK1Q8N5S9 505 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 COLGALT1Q8NBJ5 622 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ST13P5Q8NFI4 369 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CXorf38Q8TB03 319 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 GPBAR1Q8TDU6 330 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 FBF1Q8TES7 1133 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 DNASE1L2Q92874 299 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 UBE2FQ969M7 185 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 NAF1Q96HR8 494 aaKnown RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CDC6Q99741 560 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 MIPEPQ99797 713 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PHF20Q9BVI0 1012 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PLA2G12BQ9BX93 195 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 STK31Q9BXU1 1019 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 TEX13BQ9BXU2 312 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 DPH1Q9BZG8 443 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 SLC25A18Q9H1K4 315 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 VTA1Q9NP79 307 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CABP5Q9NP86 173 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 SEMA3GQ9NS98 782 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 RTEL1Q9NZ71 1219 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 FBXO40Q9UH90 709 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 DPP7Q9UHL4 492 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF214Q9UL59 606 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 TTC3P53804 2025 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PLXNA4Q9HCM2 1894 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 MN1Q10571 1320 aaPredicted RBP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ABCA7Q8IZY2 2146 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 MCM3APO60318 1980 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 NUP205Q92621 2012 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 DCHS2Q6V1P9 2916 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 KLK10O43240 276 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 KCNAB3O43448 404 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 DDX58O95786 925 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CLDN1O95832 211 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CFIP05156 583 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SYPP08247 313 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CD1EP15812 388 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 BMP7P18075 431 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CASTP20810 708 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 ENDOUP21128 410 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 HNF1BP35680 557 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 DHPSP49366 369 aaPredicted RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 DLG4P78352 724 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 GCKRQ14397 625 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 NR0B2Q15466 257 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SKIDA1Q1XH10 827 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CCDC57Q2TAC2 916 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SKOR2Q2VWA4 1001 aaPredicted RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 TBC1D25Q3MII6 688 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SPATS1Q496A3 300 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 LETMD1Q6P1Q0 360 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 C1orf228Q6PIY5 440 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 KCNT2Q6UVM3 1135 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 FAM214BQ7L5A3 538 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 GET4Q7L5D6 327 aaPredicted RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SERINC5Q86VE9 423 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 METTL16Q86W50 562 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 ERICH1Q86X53 443 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SYT12Q8IV01 421 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 ARID3BQ8IVW6 561 aaPredicted RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 MCEMP1Q8IX19 187 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 FBXO16Q8IX29 292 aaPredicted RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SYNPOQ8N3V7 929 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 MINDY1Q8N5J2 469 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 ANKS4BQ8N8V4 417 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CEP76Q8TAP6 659 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 FEZF2Q8TBJ5 459 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 PIGOQ8TEQ8 1089 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SETD7Q8WTS6 366 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SMG7Q92540 1137 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 FGD4Q96M96 766 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 GAD1Q99259 594 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 KATNAL1Q9BW62 490 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 AMNQ9BXJ7 453 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 TYW1Q9NV66 732 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SPG21Q9NZD8 308 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZSWIM5Q9P217 1185 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 TSPYL4Q9UJ04 414 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms