RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CDC42EP4Q9H3Q1 356 aaKnown RBP15.68■□□□□ 0.1
DDX55-209ENST00000542286 GINM1Q9NU53 330 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 F8VP50 259 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 ATP2A1O14983 1001 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.15e-33■■■■■ 32.3
DDX55-209ENST00000542286 ATG7O95352 703 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 RTP1P59025 263 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 CENPCQ03188 943 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 ABRAQ8N0Z2 381 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 ZNF606Q8WXB4 792 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 ADAM7Q9H2U9 754 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 SAE1Q9UBE0 346 aaPredicted RBP15.68■□□□□ 0.1
DDX55-209ENST00000542286 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
DDX55-209ENST00000542286 TBK1Q9UHD2 729 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 POLIQ9UNA4 740 aa15.68■□□□□ 0.1
DDX55-209ENST00000542286 ADGRA2Q96PE1 1338 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 PASKQ96RG2 1323 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 FSCN2O14926 492 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 ATF7P17544 494 aaPredicted RBP15.67■□□□□ 0.1
DDX55-209ENST00000542286 CLCN3P51790 818 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 ITGA8P53708 1063 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 CLDN10P78369 228 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 OGDHQ02218 1023 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 XRCC4Q13426 336 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 CYP1B1Q16678 543 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 CAPN12Q6ZSI9 719 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 TFAP2BQ92481 460 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 ART4Q93070 314 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 MINDY3Q9H8M7 445 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 ADCY3O60266 1144 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 CDH8P55286 799 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 EEF1DP3Q658K8 133 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 CACNA2D3Q8IZS8 1091 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 C3orf20Q8ND61 904 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 TLCD1Q96CP7 247 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 MCEEQ96PE7 176 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 STYXL1Q9Y6J8 313 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 PAPPA2Q9BXP8 1791 aa15.67■□□□□ 0.1
DDX55-209ENST00000542286 PIK3R2O00459 728 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 RGS16O15492 202 aaPredicted RBP15.66■□□□□ 0.1
DDX55-209ENST00000542286 MSCO60682 206 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 PIAS1O75925 651 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 ADCY8P40145 1251 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 ZNF252P-AS1Q0IIN9 211 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 LAMTOR4Q0VGL1 99 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 TARBP2Q15633 366 aaKnown RBP15.66■□□□□ 0.1
DDX55-209ENST00000542286 TMEM132AQ24JP5 1023 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 AGBL2Q5U5Z8 902 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 DPH6Q7L8W6 267 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 CGRRF1Q99675 332 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 DCLK3Q9C098 648 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 MTRF1LQ9UGC7 380 aaKnown RBP15.66■□□□□ 0.1
DDX55-209ENST00000542286 EVPLQ92817 2033 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 GOLGA8SH3BPF8 625 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 PODXLO00592 558 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 MGRN1O60291 552 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 SKAP2O75563 359 aaPredicted RBP15.66■□□□□ 0.1
DDX55-209ENST00000542286 PROSCO94903 275 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 KRT19P08727 400 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 PTP4A2Q12974 167 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 CALCOCO2Q13137 446 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 SMTNL2Q2TAL5 461 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 TBC1D31Q96DN5 1066 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 FHDC1Q9C0D6 1143 aaPredicted RBP15.66■□□□□ 0.1
DDX55-209ENST00000542286 LRRC19Q9H756 370 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 RNF19AQ9NV58 838 aa15.66■□□□□ 0.1
DDX55-209ENST00000542286 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX55-209ENST00000542286 ZBTB42B2RXF5 422 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 INO80B-WBP1J3KQ70 363 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 FAM189A1O60320 539 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 IQCF3P0C7M6 154 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 IVDP26440 423 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 MCCD1P59942 119 aaPredicted RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 BYSLQ13895 437 aaKnown RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 ACCSLQ4AC99 568 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 LACTB2Q53H82 288 aaPredicted RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 MRRFQ96E11 262 aaKnown RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 INO80BQ9C086 356 aaPredicted RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 IVNS1ABPQ9Y6Y0 642 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 NUDT17P0C025 328 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 CETPP11597 493 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 HSPA6P17066 643 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 CALRP27797 417 aaKnown RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 DRG2P55039 364 aaKnown RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 TTLL12Q14166 644 aaPredicted RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 KCNT1Q5JUK3 1230 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 FGD4Q96M96 766 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 PRMT1Q99873 361 aaKnown RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
DDX55-209ENST00000542286 GGT7Q9UJ14 662 aa15.65■□□□□ 0.1
DDX55-209ENST00000542286 SOCS7O14512 581 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 ICAM3P32942 547 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 DYNLT1P63172 113 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 AUHQ13825 339 aaKnown RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 PPP2R5EQ16537 467 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 GPAT2Q6NUI2 795 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 MFSD7Q6UXD7 560 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 ENOSF1Q7L5Y1 443 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms