RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 AHI1Q8N157 1196 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 SYNPOQ8N3V7 929 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 GALNT16Q8N428 558 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 NANOGP1Q8N7R0 232 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 FANCBQ8NB91 859 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 ACRBPQ8NEB7 543 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 CCHCR1Q8TD31 782 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 RFKQ969G6 155 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 REPS1Q96D71 796 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 PBKQ96KB5 322 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 LYZL4Q96KX0 146 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 CAMKK2Q96RR4 588 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 FEZ1Q99689 392 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 ALG8Q9BVK2 526 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 LDAHQ9H6V9 325 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 GREM2Q9H772 168 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.26□□□□□ -2.21
COPB1-212ENST00000534771 TMEM260Q9NX78 707 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 CTTNBP2NLQ9P2B4 639 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 DPP7Q9UHL4 492 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 WDR17Q8IZU2 1322 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 MYBBP1AQ9BQG0 1328 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 CCDC195A0A1B0GUA6 201 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 FAM90A10PA6NDY2 464 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 CD8B2A6NJW9 211 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 E7ENX8 843 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 SMIM22K7EJ46 135 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TOR1BO14657 336 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TRIAP1O43715 76 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 SUN1O94901 812 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 AGFG2O95081 481 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 OAZ2O95190 189 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ASMTLO95671 621 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ALPLP05186 524 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TMEM191BP0C7N4 346 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 EBLN1P0CF75 366 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 MTHFD2P13995 350 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ENPP1P22413 925 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 MT3P25713 68 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 PCSK1P29120 753 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ALDH9A1P49189 494 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 THBS3P49746 956 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 KRTAP10-3P60369 221 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 CCT2P78371 535 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 MRPS9P82933 396 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 HOXA4Q00056 320 aaPredicted RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 TAP2Q03519 686 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ERV3-1Q14264 604 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 SEMA3AQ14563 771 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 SEPT7Q16181 437 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 ADRM1Q16186 407 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.25□□□□□ -2.21
COPB1-212ENST00000534771 ANO4Q32M45 955 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 NAALADL2Q58DX5 795 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 CNNM4Q6P4Q7 775 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 SLC29A4Q7RTT9 530 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ZNF551Q7Z340 670 aaPredicted RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 LRRTM3Q86VH5 581 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ADGRG5Q8IZF4 528 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 NSUN7Q8NE18 718 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 OR2W6PQ8NHA6 318 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.25□□□□□ -2.21
COPB1-212ENST00000534771 AUTS2Q8WXX7 1259 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TBC1D5Q92609 795 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 VCPIP1Q96JH7 1222 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 RNPC3Q96LT9 517 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 C5orf34Q96MH7 638 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ACAP3Q96P50 834 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ADI1Q9BV57 179 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TLR10Q9BXR5 811 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TPSD1Q9BZJ3 242 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ARHGEF3Q9NR81 526 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 TRNAU1APQ9NX07 287 aaKnown RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 EHD3Q9NZN3 535 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 VSX1Q9NZR4 365 aaPredicted RBP1.25□□□□□ -2.21
COPB1-212ENST00000534771 SCOCQ9UIL1 159 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 ZBTB21Q9ULJ3 1066 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.25□□□□□ -2.21
COPB1-212ENST00000534771 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
COPB1-212ENST00000534771 SPATA31A3Q5VYP0 1347 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 A0A0B4J269 797 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 EME2A4GXA9 379 aaPredicted RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 FAM90A8PA6NJQ4 464 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 GOLGA8AA7E2F4 631 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 QSOX1O00391 747 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ADAMTS3O15072 1205 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 KRT86O43790 486 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 GPR32O75388 356 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 BCAR3O75815 825 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 HAUS5O94927 633 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 AMY1AP04745 511 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 FAM90A13PP0C7W8 464 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 FAM90A24PP0C7X0 464 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 MTHFD1P11586 935 aaKnown RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 JUPP14923 745 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 DDCP20711 480 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 IL1R2P27930 398 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ADCYAP1R1P41586 468 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ARHGAP25P42331 645 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms