RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-233	ENST00000531660	ITGB3	P05106	788 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	CPB1	P15086	417 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	POLR2B	P30876	1174 aa	Known RBP	18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	ANP32A	P39687	249 aa	Known RBP	18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	ARPP19	P56211	112 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	PSMD6	Q15008	389 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	METTL23	Q86XA0	190 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	CSGALNACT2	Q8N6G5	542 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	CXorf38	Q8TB03	319 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	BORCS6	Q96GS4	357 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	TIGD1	Q96MW7	591 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	KCTD10	Q9H3F6	313 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	AGAP1	Q9UPQ3	857 aa		18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.2	■□□□□ 0.5
NR1H3-233	ENST00000531660	TULP1	O00294	542 aa	Predicted RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	PRRG1	O14668	218 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	EXOC3	O60645	756 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	SP100	P23497	879 aa	Predicted RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	CYP24A1	Q07973	514 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	GPR17	Q13304	367 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	SNW1	Q13573	536 aa	Known RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	PTPN21	Q16825	1174 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	THEM5	Q8N1Q8	247 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	GUF1	Q8N442	669 aa	Known RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	SPATA18	Q8TC71	538 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	EDA	Q92838	391 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	MFSD14A	Q96MC6	490 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	FNBP1	Q96RU3	617 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	GTPBP4	Q9BZE4	634 aa	Known RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	MTMR12	Q9C0I1	747 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	CYP4F11	Q9HBI6	524 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	DMAC2	Q9NW81	257 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	CHMP5	Q9NZZ3	219 aa		18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	HOOK1	Q9UJC3	728 aa	Known RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.19	■□□□□ 0.5
NR1H3-233	ENST00000531660	TECTA	O75443	2155 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	CCL16	O15467	120 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	LRG1	P02750	347 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	MYO1E	Q12965	1108 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	TMEM31	Q5JXX7	168 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	RDH13	Q8NBN7	331 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	GSDMA	Q96QA5	445 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	CGRRF1	Q99675	332 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	AVEN	Q9NQS1	362 aa	Predicted RBP	18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	RMND1	Q9NWS8	449 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	GDAP2	Q9NXN4	497 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	EPS15L1	Q9UBC2	864 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	HSFX1	Q9UBD0	423 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	SIX4	Q9UIU6	781 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	TRAF3IP3	Q9Y228	551 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	TSC2	P49815	1807 aa		18.18	■□□□□ 0.5
NR1H3-233	ENST00000531660	CALU	O43852	315 aa	Predicted RBP	18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	SEC24A	O95486	1093 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	KRT19	P08727	400 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	TNNI1	P19237	187 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	FSHR	P23945	695 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	ZXDA	P98168	799 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	ADCY1	Q08828	1119 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	SMARCB1	Q12824	385 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	NFIL3	Q16649	462 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	RNF19B	Q6ZMZ0	732 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	TMEM86A	Q8N2M4	240 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	OR5B17	Q8NGF7	314 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	LIMD1	Q9UGP4	676 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	POLI	Q9UNA4	740 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	SORCS3	Q9UPU3	1222 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	INSL5	Q9Y5Q6	135 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	PTPRJ	Q12913	1337 aa		18.17	■□□□□ 0.5
NR1H3-233	ENST00000531660	HUS1	O60921	280 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	SMC2	O95347	1197 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	NR3C1	P04150	777 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	DLAT	P10515	647 aa	Known RBP	18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	GBP2	P32456	591 aa	Predicted RBP	18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	AP3M2	P53677	418 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	BFSP1	Q12934	665 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	PLD1	Q13393	1074 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	WSCD1	Q658N2	575 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	LMBRD2	Q68DH5	695 aa	Predicted RBP	18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	DPH6	Q7L8W6	267 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	TRAPPC11	Q7Z392	1133 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	UBALD2	Q8IYN6	164 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	ELMOD1	Q8N336	334 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	TOP6BL	Q8N6T0	577 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	NXPE3	Q969Y0	559 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	CCDC127	Q96BQ5	260 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	IGSF9	Q9P2J2	1179 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	NOTCH4	Q99466	2003 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	ZDBF2	Q9HCK1	2354 aa		18.16	■□□□□ 0.5
NR1H3-233	ENST00000531660	PRR33	A8MZF0	331 aa		18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	MAPK13	O15264	365 aa		18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	N4BP1	O75113	896 aa	Known RBP	18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	PTPN2	P17706	415 aa		18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	PNOC	Q13519	176 aa		18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	MTMR3	Q13615	1198 aa		18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	PABPC1L	Q4VXU2	614 aa	Known RBP	18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	SPATA20	Q8TB22	786 aa		18.15	■□□□□ 0.5
NR1H3-233	ENST00000531660	C2orf15	Q8WU43	125 aa	Known RBP	18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms