RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SPDYE7PQ495Y7 208 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 TMEM240Q5SV17 173 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 AFMIDQ63HM1 303 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 GGT6Q6P531 493 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 GADL1Q6ZQY3 521 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 XYLT1Q86Y38 959 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 LILRA3Q8N6C8 439 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 CPT1CQ8TCG5 803 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 NUP88Q99567 741 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 MRI1Q9BV20 369 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 SLC46A2Q9BY10 475 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 KCNH6Q9H252 994 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 CXorf56Q9H5V9 222 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 GNL3LQ9NVN8 582 aaKnown RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 AJAP1Q9UKB5 411 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 SUFUQ9UMX1 484 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 ATP11BQ9Y2G3 1177 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 REXO2Q9Y3B8 237 aaKnown RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 TNKSO95271 1327 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 MYBBP1AQ9BQG0 1328 aaKnown RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 SLC16A6O15403 523 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 MTHFD1P11586 935 aaKnown RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 CAPN2P17655 700 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 LAG3P18627 525 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 DDCP20711 480 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 C5AR1P21730 350 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 PAX7P23759 505 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 CASQ1P31415 396 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 ABCD1P33897 745 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 CHAF1AQ13111 956 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 TOB2Q14106 344 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCBP2Q15366 365 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 MFSD14BQ5SR56 506 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 CCDC181Q5TID7 509 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 IGFL4Q6B9Z1 124 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 SEM1Q6ZVN7 128 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 GDF7Q7Z4P5 450 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 ZNF276Q8N554 614 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 FAM184AQ8NB25 1140 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 ZNF483Q8TF39 744 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 CACTINQ8WUQ7 758 aaKnown RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 RANBP17Q9H2T7 1088 aaKnown RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 AASDHPPTQ9NRN7 309 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 CEP72Q9P209 647 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 RSPH14Q9UHP6 348 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 POLHQ9Y253 713 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 ANKRD6Q9Y2G4 727 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 LUC7L2Q9Y383 392 aaKnown RBP5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 DUOX2Q9NRD8 1548 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 ARHGEF12Q9NZN5 1544 aa5.32□□□□□ -1.56
HMGB3P13-201ENST00000511263 POGZQ7Z3K3 1410 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 DHX57Q6P158 1386 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 ANKRD30BQ9BXX2 1392 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 RNF123Q5XPI4 1314 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 A0A1B0GUL7 405 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 NPIPB8E9PQR5 432 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 ALDH1L1O75891 902 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 ZNF202O95125 648 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 PARNO95453 639 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 IL33O95760 270 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 AKAP5P24588 427 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 MAGEA8P43361 318 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 EPHB1P54762 984 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 NAP1L1P55209 391 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 CTXN1P60606 82 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 RAP2BP61225 183 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 PSMC1P62191 440 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 NHLH2Q02577 135 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 SYCP1Q15431 976 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 PDCD2Q16342 344 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 ZSCAN26Q16670 478 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 TIGD2Q4W5G0 525 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 LY6G5CQ5SRR4 150 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 KLHL10Q6JEL2 608 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 FOXR2Q6PJQ5 311 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 RAVER1Q8IY67 606 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 REPS2Q8NFH8 660 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 SYAP1Q96A49 352 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 COA7Q96BR5 231 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 HSPBAP1Q96EW2 488 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 CEP95Q96GE4 821 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 CFAP53Q96M91 514 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 TCF7L1Q9HCS4 588 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 CHCHD3Q9NX63 227 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 TRPM5Q9NZQ8 1165 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 NOL7Q9UMY1 257 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 FZD1Q9UP38 647 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 SMG6Q86US8 1419 aaKnown RBP5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 ITSN2Q9NZM3 1697 aa5.31□□□□□ -1.56
HMGB3P13-201ENST00000511263 CFAP74Q9C0B2 1584 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 MAST1Q9Y2H9 1570 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 IL16Q14005 1332 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 CCDC189A1A4V9 331 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 TMCO5BA8MYB1 307 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 PES1O00541 588 aaKnown RBP5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 C1SP09871 688 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 USP8P40818 1118 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 GSCP56915 257 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms